Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 Y_RNA.142-201ENST00000363491 102 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 RNU6-434P-201ENST00000384376 107 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 MIR301A-201ENST00000385261 86 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 PTMAP2-201ENST00000397627 327 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 RNU2-33P-201ENST00000410344 192 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 BX682237.1-201ENST00000415016 335 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 AL365400.1-201ENST00000431854 640 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 MTND3P23-201ENST00000431980 347 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 HMGB3P11-201ENST00000440127 604 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 PPP1R2P5-201ENST00000457256 603 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 AC112206.3-201ENST00000514578 389 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 RNU6-189P-201ENST00000516120 101 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 AC022882.1-201ENST00000532142 501 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 AC007424.1-203ENST00000554613 687 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 PSMA3P-201ENST00000555485 635 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 MIR5692A1-201ENST00000580523 69 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 AC005498.1-201ENST00000592125 465 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 AC103710.3-201ENST00000608157 948 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 AL359314.1-201ENST00000616913 261 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 SNORD39.4-201ENST00000620099 78 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 MTND1P37-201ENST00000636562 264 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 AL133412.1-201ENST00000380194 2992 ntBASIC4.38□□□□□ -1.71
SYNPOQ8N3V7 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 AC007785.2-201ENST00000598627 1916 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 Y_RNA.100-201ENST00000363141 102 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 RNU6-694P-201ENST00000364071 147 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 SNORA16.2-201ENST00000390991 127 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 HSPE1P26-201ENST00000405341 275 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 U3.42-201ENST00000408746 214 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 RNU2-37P-201ENST00000410695 177 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 AC006946.1-201ENST00000429106 328 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 RPL21P91-201ENST00000429231 479 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 NDUFB4P6-201ENST00000436819 366 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 IFNA20P-201ENST00000436840 528 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 CECR9-201ENST00000453421 199 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 RPL21P41-201ENST00000459863 264 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 SUMO2P6-201ENST00000505273 288 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 HMGB3P15-201ENST00000507326 574 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 HIGD1AP13-201ENST00000509878 289 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 RNU7-30P-201ENST00000516835 62 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 IFITM8P-201ENST00000522529 394 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 AC087241.2-201ENST00000535801 324 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 MIR548AC-201ENST00000585049 88 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 VN1R80P-201ENST00000597126 338 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 CTHRC1P1-201ENST00000605383 469 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYNPOQ8N3V7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SYNPOQ8N3V7 AC073544.1-201ENST00000600110 1595 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms