Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
COPB1P53618 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COPB1P53618 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.86□□□□□ -1.79
COPB1P53618 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.86□□□□□ -1.79
COPB1P53618 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.86□□□□□ -1.79
COPB1P53618 SNORD56.2-201ENST00000363242 71 ntBASIC3.86□□□□□ -1.79
COPB1P53618 U3.11-201ENST00000364476 212 ntBASIC3.86□□□□□ -1.79
COPB1P53618 SNORA69-201ENST00000383895 132 ntBASIC3.86□□□□□ -1.79
COPB1P53618 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COPB1P53618 RNU2-9P-201ENST00000410194 145 ntBASIC3.86□□□□□ -1.79
COPB1P53618 CRYBB2P1-203ENST00000415709 538 ntBASIC3.86□□□□□ -1.79
COPB1P53618 RPS7P15-201ENST00000415804 584 ntBASIC3.86□□□□□ -1.79
COPB1P53618 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.86□□□□□ -1.79
COPB1P53618 BX679664.1-201ENST00000434429 253 ntBASIC3.86□□□□□ -1.79
COPB1P53618 MTND4P25-201ENST00000441039 533 ntBASIC3.86□□□□□ -1.79
COPB1P53618 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.86□□□□□ -1.79
COPB1P53618 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.86□□□□□ -1.79
COPB1P53618 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.86□□□□□ -1.79
COPB1P53618 AC022364.2-201ENST00000457963 554 ntBASIC3.86□□□□□ -1.79
COPB1P53618 AL049714.1-201ENST00000466686 347 ntBASIC3.86□□□□□ -1.79
COPB1P53618 RPL21P103-201ENST00000479921 488 ntBASIC3.86□□□□□ -1.79
COPB1P53618 AC008628.2-201ENST00000502605 298 ntBASIC3.86□□□□□ -1.79
COPB1P53618 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.86□□□□□ -1.79
COPB1P53618 SNORD27.1-201ENST00000516319 72 ntBASIC3.86□□□□□ -1.79
COPB1P53618 RNU6-410P-201ENST00000517006 107 ntBASIC3.86□□□□□ -1.79
COPB1P53618 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.86□□□□□ -1.79
COPB1P53618 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.86□□□□□ -1.79
COPB1P53618 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.86□□□□□ -1.79
COPB1P53618 AC055876.1-202ENST00000567053 138 ntBASIC3.86□□□□□ -1.79
COPB1P53618 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.86□□□□□ -1.79
COPB1P53618 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.86□□□□□ -1.79
COPB1P53618 AC009994.1-201ENST00000606889 253 ntBASIC3.86□□□□□ -1.79
COPB1P53618 RMST_3.1-201ENST00000611651 109 ntBASIC3.86□□□□□ -1.79
COPB1P53618 AC104260.1-201ENST00000616660 539 ntBASIC3.86□□□□□ -1.79
COPB1P53618 AL359314.1-201ENST00000616913 261 ntBASIC3.86□□□□□ -1.79
COPB1P53618 AC244100.1-202ENST00000621554 382 ntBASIC3.86□□□□□ -1.79
COPB1P53618 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.86□□□□□ -1.79
COPB1P53618 AC138649.5-201ENST00000637456 137 ntBASIC3.86□□□□□ -1.79
COPB1P53618 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COPB1P53618 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
COPB1P53618 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.86□□□□□ -1.79
COPB1P53618 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.86□□□□□ -1.79
COPB1P53618 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COPB1P53618 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.85□□□□□ -1.79
COPB1P53618 AC007823.1-201ENST00000569932 1566 ntBASIC3.85□□□□□ -1.79
COPB1P53618 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COPB1P53618 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COPB1P53618 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
COPB1P53618 RNU5E-8P-201ENST00000363502 116 ntBASIC3.85□□□□□ -1.79
COPB1P53618 SNORD6-201ENST00000365444 73 ntBASIC3.85□□□□□ -1.79
COPB1P53618 RNU6-754P-201ENST00000391166 107 ntBASIC3.85□□□□□ -1.79
COPB1P53618 RNU2-41P-201ENST00000410991 178 ntBASIC3.85□□□□□ -1.79
COPB1P53618 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.85□□□□□ -1.79
COPB1P53618 RPL21P111-201ENST00000418453 477 ntBASIC3.85□□□□□ -1.79
COPB1P53618 DBIP2-201ENST00000419076 262 ntBASIC3.85□□□□□ -1.79
COPB1P53618 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.85□□□□□ -1.79
COPB1P53618 AP000907.1-201ENST00000428428 510 ntBASIC3.85□□□□□ -1.79
COPB1P53618 OR4K11P-201ENST00000431829 904 ntBASIC3.85□□□□□ -1.79
COPB1P53618 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COPB1P53618 SEPT14P3-201ENST00000439401 183 ntBASIC3.85□□□□□ -1.79
COPB1P53618 USP9YP8-201ENST00000441913 500 ntBASIC3.85□□□□□ -1.79
COPB1P53618 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.85□□□□□ -1.79
COPB1P53618 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.85□□□□□ -1.79
COPB1P53618 AL732372.2-207ENST00000445840 183 ntBASIC3.85□□□□□ -1.79
COPB1P53618 SEPT14P2-201ENST00000453405 183 ntBASIC3.85□□□□□ -1.79
COPB1P53618 RPS4XP2-201ENST00000458402 793 ntBASIC3.85□□□□□ -1.79
COPB1P53618 RNU7-170P-201ENST00000459303 61 ntBASIC3.85□□□□□ -1.79
COPB1P53618 RNU6-261P-201ENST00000459506 102 ntBASIC3.85□□□□□ -1.79
COPB1P53618 AC135721.1-201ENST00000497954 479 ntBASIC3.85□□□□□ -1.79
COPB1P53618 AC091951.2-201ENST00000500762 203 ntBASIC3.85□□□□□ -1.79
COPB1P53618 AC018710.1-201ENST00000506509 158 ntBASIC3.85□□□□□ -1.79
COPB1P53618 SEPT14P4-201ENST00000513445 186 ntBASIC3.85□□□□□ -1.79
COPB1P53618 SNORA70.18-201ENST00000516696 98 ntBASIC3.85□□□□□ -1.79
COPB1P53618 FO082796.1-201ENST00000523795 183 ntBASIC3.85□□□□□ -1.79
COPB1P53618 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.85□□□□□ -1.79
COPB1P53618 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.85□□□□□ -1.79
COPB1P53618 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.85□□□□□ -1.79
COPB1P53618 HIF1AP1-201ENST00000553642 175 ntBASIC3.85□□□□□ -1.79
COPB1P53618 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.85□□□□□ -1.79
COPB1P53618 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.85□□□□□ -1.79
COPB1P53618 NRBF2P5-201ENST00000603087 788 ntBASIC3.85□□□□□ -1.79
COPB1P53618 AC012669.1-201ENST00000603209 283 ntBASIC3.85□□□□□ -1.79
COPB1P53618 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.85□□□□□ -1.79
COPB1P53618 AP003355.3-201ENST00000623465 114 ntBASIC3.85□□□□□ -1.79
COPB1P53618 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
COPB1P53618 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COPB1P53618 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COPB1P53618 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
COPB1P53618 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
COPB1P53618 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COPB1P53618 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COPB1P53618 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.84□□□□□ -1.79
COPB1P53618 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COPB1P53618 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.84□□□□□ -1.79
COPB1P53618 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
COPB1P53618 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COPB1P53618 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.84□□□□□ -1.79
COPB1P53618 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.84□□□□□ -1.79
COPB1P53618 FRG1CP-201ENST00000358464 769 ntBASIC3.84□□□□□ -1.79
COPB1P53618 RNU6-797P-201ENST00000363101 109 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms