Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC025449.1-201ENST00000603896 529 ntBASIC3.49□□□□□ -1.85
LDB2O43679 AC008536.2-201ENST00000607284 349 ntBASIC3.49□□□□□ -1.85
LDB2O43679 AC004067.1-201ENST00000608733 700 ntBASIC3.49□□□□□ -1.85
LDB2O43679 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.49□□□□□ -1.85
LDB2O43679 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB2O43679 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB2O43679 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB2O43679 AL365440.1-201ENST00000436135 2167 ntBASIC3.49□□□□□ -1.85
LDB2O43679 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB2O43679 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LDB2O43679 AL645937.1-201ENST00000641739 1652 ntBASIC3.49□□□□□ -1.85
LDB2O43679 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.49□□□□□ -1.85
LDB2O43679 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.48□□□□□ -1.85
LDB2O43679 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LDB2O43679 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LDB2O43679 HSPE1P11-201ENST00000339579 310 ntBASIC3.48□□□□□ -1.85
LDB2O43679 RNU6-223P-201ENST00000362830 107 ntBASIC3.48□□□□□ -1.85
LDB2O43679 RNU6-511P-201ENST00000363496 107 ntBASIC3.48□□□□□ -1.85
LDB2O43679 MIR135A2-201ENST00000384854 100 ntBASIC3.48□□□□□ -1.85
LDB2O43679 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
LDB2O43679 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
LDB2O43679 FGF7P8-201ENST00000402994 292 ntBASIC3.48□□□□□ -1.85
LDB2O43679 RNU4-65P-201ENST00000410473 140 ntBASIC3.48□□□□□ -1.85
LDB2O43679 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LDB2O43679 AC099677.1-201ENST00000420575 175 ntBASIC3.48□□□□□ -1.85
LDB2O43679 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB2O43679 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB2O43679 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB2O43679 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.48□□□□□ -1.85
LDB2O43679 RPL7P54-201ENST00000438336 674 ntBASIC3.48□□□□□ -1.85
LDB2O43679 HMGB3P12-201ENST00000438745 556 ntBASIC3.48□□□□□ -1.85
LDB2O43679 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB2O43679 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB2O43679 AC016696.1-201ENST00000446949 318 ntBASIC3.48□□□□□ -1.85
LDB2O43679 CYCSP35-201ENST00000451978 304 ntBASIC3.48□□□□□ -1.85
LDB2O43679 RNU6-420P-201ENST00000458780 107 ntBASIC3.48□□□□□ -1.85
LDB2O43679 RPL36AP51-201ENST00000487216 318 ntBASIC3.48□□□□□ -1.85
LDB2O43679 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.48□□□□□ -1.85
LDB2O43679 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.48□□□□□ -1.85
LDB2O43679 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.48□□□□□ -1.85
LDB2O43679 AC114797.1-201ENST00000514003 728 ntBASIC3.48□□□□□ -1.85
LDB2O43679 AC026801.2-201ENST00000515352 425 ntBASIC3.48□□□□□ -1.85
LDB2O43679 RNU2-10P-201ENST00000516375 211 ntBASIC3.48□□□□□ -1.85
LDB2O43679 MTND1P35-201ENST00000526739 508 ntBASIC3.48□□□□□ -1.85
LDB2O43679 OR4R1P-201ENST00000529879 463 ntBASIC3.48□□□□□ -1.85
LDB2O43679 AC103843.2-201ENST00000530523 682 ntBASIC3.48□□□□□ -1.85
LDB2O43679 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.48□□□□□ -1.85
LDB2O43679 AC018630.1-201ENST00000541376 925 ntBASIC3.48□□□□□ -1.85
LDB2O43679 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.48□□□□□ -1.85
LDB2O43679 AC126177.3-201ENST00000551839 688 ntBASIC3.48□□□□□ -1.85
LDB2O43679 RPL21P12-201ENST00000559810 515 ntBASIC3.48□□□□□ -1.85
LDB2O43679 AP005205.1-201ENST00000563503 508 ntBASIC3.48□□□□□ -1.85
LDB2O43679 AL162413.1-201ENST00000603198 110 ntBASIC3.48□□□□□ -1.85
LDB2O43679 Z84480.1-201ENST00000605131 311 ntBASIC3.48□□□□□ -1.85
LDB2O43679 AC022306.2-201ENST00000617563 647 ntBASIC3.48□□□□□ -1.85
LDB2O43679 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.48□□□□□ -1.85
LDB2O43679 AC019226.1-201ENST00000625666 515 ntBASIC3.48□□□□□ -1.85
LDB2O43679 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
LDB2O43679 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
LDB2O43679 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.48□□□□□ -1.85
LDB2O43679 AL353746.1-201ENST00000566293 6881 ntBASIC3.48□□□□□ -1.85
LDB2O43679 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
LDB2O43679 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.47□□□□□ -1.85
LDB2O43679 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.47□□□□□ -1.85
LDB2O43679 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LDB2O43679 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
LDB2O43679 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LDB2O43679 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.47□□□□□ -1.85
LDB2O43679 Y_RNA.295-201ENST00000364918 102 ntBASIC3.47□□□□□ -1.85
LDB2O43679 RNU6-867P-201ENST00000364956 107 ntBASIC3.47□□□□□ -1.85
LDB2O43679 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LDB2O43679 MIR1-2-201ENST00000384961 85 ntBASIC3.47□□□□□ -1.85
LDB2O43679 MRPL50P2-201ENST00000416821 482 ntBASIC3.47□□□□□ -1.85
LDB2O43679 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.47□□□□□ -1.85
LDB2O43679 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.47□□□□□ -1.85
LDB2O43679 AP000907.1-201ENST00000428428 510 ntBASIC3.47□□□□□ -1.85
LDB2O43679 AC005094.1-201ENST00000440420 368 ntBASIC3.47□□□□□ -1.85
LDB2O43679 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB2O43679 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB2O43679 DPPA3P1-201ENST00000448050 469 ntBASIC3.47□□□□□ -1.85
LDB2O43679 FDX1P2-201ENST00000450769 375 ntBASIC3.47□□□□□ -1.85
LDB2O43679 MRPS31P2-201ENST00000451581 518 ntBASIC3.47□□□□□ -1.85
LDB2O43679 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB2O43679 HMGN2P7-201ENST00000456186 273 ntBASIC3.47□□□□□ -1.85
LDB2O43679 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB2O43679 RPS4XP2-201ENST00000458402 793 ntBASIC3.47□□□□□ -1.85
LDB2O43679 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB2O43679 AC083798.1-201ENST00000472671 131 ntBASIC3.47□□□□□ -1.85
LDB2O43679 AC092451.1-201ENST00000480211 153 ntBASIC3.47□□□□□ -1.85
LDB2O43679 AP001086.1-201ENST00000494882 321 ntBASIC3.47□□□□□ -1.85
LDB2O43679 AC110768.1-201ENST00000509222 400 ntBASIC3.47□□□□□ -1.85
LDB2O43679 AC005921.1-201ENST00000510589 286 ntBASIC3.47□□□□□ -1.85
LDB2O43679 NDUFB4P9-201ENST00000511646 388 ntBASIC3.47□□□□□ -1.85
LDB2O43679 AC074344.1-201ENST00000512823 224 ntBASIC3.47□□□□□ -1.85
LDB2O43679 SNORA70.14-201ENST00000516205 110 ntBASIC3.47□□□□□ -1.85
LDB2O43679 RNU6-64P-201ENST00000517119 105 ntBASIC3.47□□□□□ -1.85
LDB2O43679 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB2O43679 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB2O43679 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.47□□□□□ -1.85
LDB2O43679 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms