Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 MIR340-201ENST00000362125 95 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 RNA5SP336-201ENST00000364189 117 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 RNA5SP379-201ENST00000364599 113 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 RNU6-1335P-201ENST00000365426 107 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 Y_RNA.371-201ENST00000365591 113 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 RNVU1-15-201ENST00000384476 165 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 MIR595-201ENST00000384905 96 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 MIR637-201ENST00000385000 99 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 Z97987.1-202ENST00000411708 391 ntTSL 3 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 AL139148.1-201ENST00000427122 680 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 AL360181.1-201ENST00000452591 184 ntTSL 5 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 RNU7-73P-201ENST00000458743 63 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 RN7SL856P-201ENST00000461754 298 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 AP002957.1-201ENST00000525952 406 ntTSL 3 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 AC024614.1-201ENST00000577546 307 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 RN7SL154P-201ENST00000578043 324 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 SNORD92-201ENST00000585078 85 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 U47924.1-201ENST00000606539 434 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 RN7SKP290-201ENST00000606842 195 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 AC239859.6-201ENST00000622095 213 ntBASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC3.95□□□□□ -1.78
KRTAP3-3Q9BYR6 AL590004.4-201ENST00000566733 7060 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 Z97832.2-201ENST00000605896 4261 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 FBXO38-201ENST00000296701 3680 ntTSL 2 BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 RN7SKP25-201ENST00000362449 308 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 Y_RNA.42-201ENST00000362660 108 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 SNORA24-201ENST00000384096 131 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 AL031864.1-201ENST00000392075 423 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 AL606490.3-201ENST00000422410 270 ntTSL 5 BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 RPL35P4-201ENST00000446039 322 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 AL590648.3-201ENST00000446962 473 ntTSL 3 BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 SNRPGP12-201ENST00000449481 213 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 BX510359.1-201ENST00000456973 237 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 RN7SL160P-201ENST00000468558 284 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 RN7SL573P-201ENST00000485340 276 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 RN7SL464P-201ENST00000492743 297 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 RN7SL812P-201ENST00000493791 279 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 RN7SL220P-201ENST00000581978 300 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 AC006023.1-201ENST00000603944 259 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 Metazoa_SRP.169-201ENST00000613708 283 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 AL109933.3-201ENST00000619095 188 ntBASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 APP-206ENST00000359726 3294 ntTSL 2 BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC3.94□□□□□ -1.78
KRTAP3-3Q9BYR6 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms