Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SNORD91B-202ENST00000608459 222 ntBASIC5.13□□□□□ -1.59
RARAP10276 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.13□□□□□ -1.59
RARAP10276 MIR4275-201ENST00000636486 87 ntBASIC5.13□□□□□ -1.59
RARAP10276 AL672167.1-205ENST00000641112 3080 ntBASIC5.13□□□□□ -1.59
RARAP10276 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RARAP10276 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.13□□□□□ -1.59
RARAP10276 ZNF285B-201ENST00000561698 1767 ntBASIC5.13□□□□□ -1.59
RARAP10276 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.13□□□□□ -1.59
RARAP10276 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.13□□□□□ -1.59
RARAP10276 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RARAP10276 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RARAP10276 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RARAP10276 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RARAP10276 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.12□□□□□ -1.59
RARAP10276 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.12□□□□□ -1.59
RARAP10276 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RARAP10276 SAGE2P-201ENST00000420011 2126 ntBASIC5.12□□□□□ -1.59
RARAP10276 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RARAP10276 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RARAP10276 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RARAP10276 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RARAP10276 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.12□□□□□ -1.59
RARAP10276 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
RARAP10276 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RARAP10276 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RARAP10276 Y_RNA.180-201ENST00000363867 113 ntBASIC5.12□□□□□ -1.59
RARAP10276 Y_RNA.462-201ENST00000384268 102 ntBASIC5.12□□□□□ -1.59
RARAP10276 Y_RNA.471-201ENST00000384312 102 ntBASIC5.12□□□□□ -1.59
RARAP10276 AL357515.1-201ENST00000402967 542 ntBASIC5.12□□□□□ -1.59
RARAP10276 AL592291.1-201ENST00000403830 352 ntBASIC5.12□□□□□ -1.59
RARAP10276 RNU2-43P-201ENST00000410306 190 ntBASIC5.12□□□□□ -1.59
RARAP10276 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.12□□□□□ -1.59
RARAP10276 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.12□□□□□ -1.59
RARAP10276 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.12□□□□□ -1.59
RARAP10276 AL392103.1-201ENST00000447000 198 ntBASIC5.12□□□□□ -1.59
RARAP10276 PRDX3P3-201ENST00000447765 522 ntBASIC5.12□□□□□ -1.59
RARAP10276 PRELID3BP1-201ENST00000457142 540 ntBASIC5.12□□□□□ -1.59
RARAP10276 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.12□□□□□ -1.59
RARAP10276 RN7SKP66-201ENST00000516681 231 ntBASIC5.12□□□□□ -1.59
RARAP10276 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.12□□□□□ -1.59
RARAP10276 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.12□□□□□ -1.59
RARAP10276 TRAV32-201ENST00000553993 340 ntBASIC5.12□□□□□ -1.59
RARAP10276 MIR4716-201ENST00000579628 84 ntBASIC5.12□□□□□ -1.59
RARAP10276 RPS29P30-201ENST00000600975 111 ntBASIC5.12□□□□□ -1.59
RARAP10276 AL158827.2-201ENST00000602494 330 ntBASIC5.12□□□□□ -1.59
RARAP10276 FTX_2.1-201ENST00000618816 94 ntBASIC5.12□□□□□ -1.59
RARAP10276 SNORD39.4-201ENST00000620099 78 ntBASIC5.12□□□□□ -1.59
RARAP10276 FP236240.3-201ENST00000623061 327 ntBASIC5.12□□□□□ -1.59
RARAP10276 AL691447.3-201ENST00000635020 330 ntBASIC5.12□□□□□ -1.59
RARAP10276 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RARAP10276 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RARAP10276 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RARAP10276 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
RARAP10276 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RARAP10276 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RARAP10276 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.11□□□□□ -1.59
RARAP10276 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RARAP10276 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RARAP10276 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RARAP10276 C4BPAP1-201ENST00000415474 1893 ntBASIC5.11□□□□□ -1.59
RARAP10276 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RARAP10276 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RARAP10276 AC027228.2-201ENST00000567141 2154 ntBASIC5.11□□□□□ -1.59
RARAP10276 RNU6-611P-201ENST00000384276 104 ntBASIC5.11□□□□□ -1.59
RARAP10276 MIR1250-201ENST00000408098 113 ntBASIC5.11□□□□□ -1.59
RARAP10276 U3.42-201ENST00000408746 214 ntBASIC5.11□□□□□ -1.59
RARAP10276 MIR548H3-201ENST00000408771 118 ntBASIC5.11□□□□□ -1.59
RARAP10276 CYCSP33-201ENST00000414485 327 ntBASIC5.11□□□□□ -1.59
RARAP10276 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.11□□□□□ -1.59
RARAP10276 MTCO3P19-201ENST00000415864 321 ntBASIC5.11□□□□□ -1.59
RARAP10276 RPL21P38-201ENST00000418090 167 ntBASIC5.11□□□□□ -1.59
RARAP10276 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.11□□□□□ -1.59
RARAP10276 AC000111.2-201ENST00000448200 210 ntBASIC5.11□□□□□ -1.59
RARAP10276 RPS11P1-201ENST00000451072 473 ntBASIC5.11□□□□□ -1.59
RARAP10276 RN7SL319P-201ENST00000480656 221 ntBASIC5.11□□□□□ -1.59
RARAP10276 AC012158.1-204ENST00000483430 465 ntBASIC5.11□□□□□ -1.59
RARAP10276 RN7SL97P-201ENST00000486780 299 ntBASIC5.11□□□□□ -1.59
RARAP10276 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.11□□□□□ -1.59
RARAP10276 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.11□□□□□ -1.59
RARAP10276 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.11□□□□□ -1.59
RARAP10276 RNA5SP392-201ENST00000516905 112 ntBASIC5.11□□□□□ -1.59
RARAP10276 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.11□□□□□ -1.59
RARAP10276 AC034114.1-201ENST00000520293 285 ntBASIC5.11□□□□□ -1.59
RARAP10276 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.11□□□□□ -1.59
RARAP10276 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.11□□□□□ -1.59
RARAP10276 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.11□□□□□ -1.59
RARAP10276 MIR548AC-201ENST00000585049 88 ntBASIC5.11□□□□□ -1.59
RARAP10276 AC087783.2-201ENST00000605070 562 ntBASIC5.11□□□□□ -1.59
RARAP10276 MIR3976-201ENST00000606807 139 ntBASIC5.11□□□□□ -1.59
RARAP10276 AC019206.1-201ENST00000621938 425 ntBASIC5.11□□□□□ -1.59
RARAP10276 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.11□□□□□ -1.59
RARAP10276 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RARAP10276 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
RARAP10276 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RARAP10276 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RARAP10276 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RARAP10276 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RARAP10276 PRO1804-201ENST00000623780 2050 ntBASIC5.11□□□□□ -1.59
RARAP10276 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RARAP10276 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms