Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.2□□□□□ -1.9
CD48P09326 DUXAP4-201ENST00000603046 613 ntBASIC3.2□□□□□ -1.9
CD48P09326 BX664608.1-201ENST00000610519 487 ntBASIC3.2□□□□□ -1.9
CD48P09326 AC084757.4-201ENST00000616350 526 ntBASIC3.2□□□□□ -1.9
CD48P09326 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.2□□□□□ -1.9
CD48P09326 AC012150.2-201ENST00000621300 544 ntBASIC3.2□□□□□ -1.9
CD48P09326 AC138649.3-201ENST00000622154 254 ntBASIC3.2□□□□□ -1.9
CD48P09326 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
CD48P09326 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CD48P09326 AC092125.1-201ENST00000562568 1995 ntBASIC3.2□□□□□ -1.9
CD48P09326 MAPK10-362ENST00000641864 4484 ntBASIC3.19□□□□□ -1.9
CD48P09326 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CD48P09326 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.19□□□□□ -1.9
CD48P09326 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CD48P09326 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD48P09326 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.19□□□□□ -1.9
CD48P09326 AC073325.2-201ENST00000339545 159 ntBASIC3.19□□□□□ -1.9
CD48P09326 RNU6-97P-201ENST00000363387 104 ntBASIC3.19□□□□□ -1.9
CD48P09326 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.19□□□□□ -1.9
CD48P09326 MIR153-1-201ENST00000384914 90 ntBASIC3.19□□□□□ -1.9
CD48P09326 MIR181A1-201ENST00000385026 110 ntBASIC3.19□□□□□ -1.9
CD48P09326 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CD48P09326 U3.20-201ENST00000390909 217 ntBASIC3.19□□□□□ -1.9
CD48P09326 RNU2-8P-201ENST00000410727 190 ntBASIC3.19□□□□□ -1.9
CD48P09326 AC245054.2-201ENST00000415639 319 ntBASIC3.19□□□□□ -1.9
CD48P09326 AC007390.1-201ENST00000415722 356 ntBASIC3.19□□□□□ -1.9
CD48P09326 AL158156.1-201ENST00000422509 473 ntBASIC3.19□□□□□ -1.9
CD48P09326 ISCA1P1-201ENST00000426679 387 ntBASIC3.19□□□□□ -1.9
CD48P09326 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.19□□□□□ -1.9
CD48P09326 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.19□□□□□ -1.9
CD48P09326 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.19□□□□□ -1.9
CD48P09326 UBE2V1P13-201ENST00000436983 439 ntBASIC3.19□□□□□ -1.9
CD48P09326 MTND1P9-201ENST00000453775 944 ntBASIC3.19□□□□□ -1.9
CD48P09326 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.19□□□□□ -1.9
CD48P09326 RPL9P32-201ENST00000464118 620 ntBASIC3.19□□□□□ -1.9
CD48P09326 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.19□□□□□ -1.9
CD48P09326 RN7SL601P-201ENST00000471221 293 ntBASIC3.19□□□□□ -1.9
CD48P09326 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.19□□□□□ -1.9
CD48P09326 AC108860.1-201ENST00000484521 383 ntBASIC3.19□□□□□ -1.9
CD48P09326 RPL23AP41-201ENST00000484754 458 ntBASIC3.19□□□□□ -1.9
CD48P09326 RN7SL504P-201ENST00000494496 287 ntBASIC3.19□□□□□ -1.9
CD48P09326 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.19□□□□□ -1.9
CD48P09326 AC109927.2-201ENST00000506416 303 ntBASIC3.19□□□□□ -1.9
CD48P09326 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.19□□□□□ -1.9
CD48P09326 AC108078.1-201ENST00000508073 725 ntBASIC3.19□□□□□ -1.9
CD48P09326 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.19□□□□□ -1.9
CD48P09326 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.19□□□□□ -1.9
CD48P09326 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
CD48P09326 RNA5SP385-201ENST00000515947 110 ntBASIC3.19□□□□□ -1.9
CD48P09326 RNU6-1178P-201ENST00000516674 107 ntBASIC3.19□□□□□ -1.9
CD48P09326 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.19□□□□□ -1.9
CD48P09326 AP003181.2-201ENST00000528941 181 ntBASIC3.19□□□□□ -1.9
CD48P09326 DEFB108A-201ENST00000530110 222 ntBASIC3.19□□□□□ -1.9
CD48P09326 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.19□□□□□ -1.9
CD48P09326 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.19□□□□□ -1.9
CD48P09326 MIR3118-1-201ENST00000581787 76 ntBASIC3.19□□□□□ -1.9
CD48P09326 UBE2L4-201ENST00000587688 464 ntBASIC3.19□□□□□ -1.9
CD48P09326 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.19□□□□□ -1.9
CD48P09326 SRGNP1-201ENST00000603392 451 ntBASIC3.19□□□□□ -1.9
CD48P09326 AL161756.2-201ENST00000604597 246 ntBASIC3.19□□□□□ -1.9
CD48P09326 RBM11P1-201ENST00000604951 799 ntBASIC3.19□□□□□ -1.9
CD48P09326 AL160281.1-201ENST00000605307 311 ntBASIC3.19□□□□□ -1.9
CD48P09326 AC126118.1-201ENST00000607744 628 ntBASIC3.19□□□□□ -1.9
CD48P09326 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.19□□□□□ -1.9
CD48P09326 AL355472.4-201ENST00000610233 626 ntBASIC3.19□□□□□ -1.9
CD48P09326 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.19□□□□□ -1.9
CD48P09326 AC002550.2-201ENST00000621246 394 ntBASIC3.19□□□□□ -1.9
CD48P09326 AL158801.5-201ENST00000623123 465 ntBASIC3.19□□□□□ -1.9
CD48P09326 AC124864.2-201ENST00000624736 186 ntBASIC3.19□□□□□ -1.9
CD48P09326 SEPT14P19-203ENST00000633205 211 ntBASIC3.19□□□□□ -1.9
CD48P09326 AC010149.2-201ENST00000637608 315 ntBASIC3.19□□□□□ -1.9
CD48P09326 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.19□□□□□ -1.9
CD48P09326 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD48P09326 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CD48P09326 AC011460.1-201ENST00000636268 1834 ntBASIC3.19□□□□□ -1.9
CD48P09326 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD48P09326 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CD48P09326 AL672296.1-201ENST00000427780 2158 ntBASIC3.18□□□□□ -1.9
CD48P09326 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CD48P09326 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CD48P09326 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CD48P09326 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CD48P09326 GNG5P1-201ENST00000255500 204 ntBASIC3.18□□□□□ -1.9
CD48P09326 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CD48P09326 RNU6-989P-201ENST00000362756 107 ntBASIC3.18□□□□□ -1.9
CD48P09326 RNY4P34-201ENST00000364779 95 ntBASIC3.18□□□□□ -1.9
CD48P09326 RNU6-1103P-201ENST00000384150 107 ntBASIC3.18□□□□□ -1.9
CD48P09326 SNORA54-201ENST00000384281 123 ntBASIC3.18□□□□□ -1.9
CD48P09326 Y_RNA.548-201ENST00000384656 105 ntBASIC3.18□□□□□ -1.9
CD48P09326 RNU6-821P-201ENST00000390995 107 ntBASIC3.18□□□□□ -1.9
CD48P09326 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.18□□□□□ -1.9
CD48P09326 MTND3P17-201ENST00000416968 344 ntBASIC3.18□□□□□ -1.9
CD48P09326 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.18□□□□□ -1.9
CD48P09326 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.18□□□□□ -1.9
CD48P09326 AC244505.4-201ENST00000434905 287 ntBASIC3.18□□□□□ -1.9
CD48P09326 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.18□□□□□ -1.9
CD48P09326 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.18□□□□□ -1.9
CD48P09326 MTCO2P3-201ENST00000442543 421 ntBASIC3.18□□□□□ -1.9
CD48P09326 SSXP5-201ENST00000443473 287 ntBASIC3.18□□□□□ -1.9
CD48P09326 AC112653.1-201ENST00000443851 386 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms