Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
MSH5O43196 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC8.84□□□□□ -1
MSH5O43196 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC8.83□□□□□ -1
MSH5O43196 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
MSH5O43196 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
MSH5O43196 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC8.83□□□□□ -1
MSH5O43196 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC8.83□□□□□ -1
MSH5O43196 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
MSH5O43196 SNORA66-201ENST00000384792 133 ntBASIC8.83□□□□□ -1
MSH5O43196 RNA5SP318-201ENST00000516352 92 ntBASIC8.83□□□□□ -1
MSH5O43196 SUMO2P16-201ENST00000519475 264 ntBASIC8.83□□□□□ -1
MSH5O43196 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC8.83□□□□□ -1
MSH5O43196 AC087752.2-201ENST00000521219 281 ntBASIC8.83□□□□□ -1
MSH5O43196 IGKV3D-34-201ENST00000522638 302 ntBASIC8.83□□□□□ -1
MSH5O43196 AL138895.2-201ENST00000603019 178 ntBASIC8.83□□□□□ -1
MSH5O43196 AC022217.4-201ENST00000604389 163 ntBASIC8.83□□□□□ -1
MSH5O43196 AL359198.2-201ENST00000611836 194 ntBASIC8.83□□□□□ -1
MSH5O43196 uc_338.4-201ENST00000616635 176 ntBASIC8.83□□□□□ -1
MSH5O43196 MIR6864-201ENST00000617935 70 ntBASIC8.83□□□□□ -1
MSH5O43196 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC8.83□□□□□ -1
MSH5O43196 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
MSH5O43196 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
MSH5O43196 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC8.82□□□□□ -1
MSH5O43196 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
MSH5O43196 AL359263.1-201ENST00000441188 2796 ntBASIC8.82□□□□□ -1
MSH5O43196 SNORA1-201ENST00000384107 130 ntBASIC8.82□□□□□ -1
MSH5O43196 SDHCP3-201ENST00000445371 506 ntBASIC8.82□□□□□ -1
MSH5O43196 RN7SL160P-201ENST00000468558 284 ntBASIC8.82□□□□□ -1
MSH5O43196 AC091544.4-201ENST00000555268 342 ntBASIC8.82□□□□□ -1
MSH5O43196 AC012468.1-201ENST00000604888 430 ntBASIC8.82□□□□□ -1
MSH5O43196 uc_338.13-201ENST00000618243 179 ntBASIC8.82□□□□□ -1
MSH5O43196 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
MSH5O43196 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
MSH5O43196 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -1
MSH5O43196 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
MSH5O43196 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC8.82□□□□□ -1
MSH5O43196 LINC01613-201ENST00000561476 2780 ntBASIC8.82□□□□□ -1
MSH5O43196 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC8.82□□□□□ -1
MSH5O43196 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
MSH5O43196 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC8.82□□□□□ -1
MSH5O43196 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
MSH5O43196 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
MSH5O43196 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
MSH5O43196 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC8.81□□□□□ -1
MSH5O43196 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC8.81□□□□□ -1
MSH5O43196 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
MSH5O43196 MIR320B2-201ENST00000408479 138 ntBASIC8.81□□□□□ -1
MSH5O43196 SNORA77.2-201ENST00000408571 112 ntBASIC8.81□□□□□ -1
MSH5O43196 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC8.81□□□□□ -1
MSH5O43196 RPS29P14-201ENST00000431518 171 ntBASIC8.81□□□□□ -1
MSH5O43196 RPS4XP23-201ENST00000487801 237 ntBASIC8.81□□□□□ -1
MSH5O43196 AC002064.3-201ENST00000623448 346 ntBASIC8.81□□□□□ -1
MSH5O43196 JPX-212ENST00000639185 9658 ntTSL 5 BASIC8.81□□□□□ -1
MSH5O43196 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
MSH5O43196 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC8.81□□□□□ -1
MSH5O43196 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC8.81□□□□□ -1
MSH5O43196 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC8.81□□□□□ -1
MSH5O43196 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC8.81□□□□□ -1
MSH5O43196 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC8.8□□□□□ -1
MSH5O43196 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
MSH5O43196 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC8.8□□□□□ -1
MSH5O43196 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
MSH5O43196 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
MSH5O43196 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC8.8□□□□□ -1
MSH5O43196 RN7SKP107-201ENST00000364157 290 ntBASIC8.8□□□□□ -1
MSH5O43196 RNA5SP77-201ENST00000365394 120 ntBASIC8.8□□□□□ -1
MSH5O43196 RNU6-1323P-201ENST00000384025 107 ntBASIC8.8□□□□□ -1
MSH5O43196 RNU6-1104P-201ENST00000384723 104 ntBASIC8.8□□□□□ -1
MSH5O43196 RN7SKP16-201ENST00000410180 299 ntBASIC8.8□□□□□ -1
MSH5O43196 RNU2-68P-201ENST00000410878 191 ntBASIC8.8□□□□□ -1
MSH5O43196 AL389915.2-201ENST00000454576 441 ntBASIC8.8□□□□□ -1
MSH5O43196 RN7SL552P-201ENST00000462094 276 ntBASIC8.8□□□□□ -1
MSH5O43196 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC8.8□□□□□ -1
MSH5O43196 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC8.8□□□□□ -1
MSH5O43196 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC8.8□□□□□ -1
MSH5O43196 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
MSH5O43196 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.79□□□□□ -1
MSH5O43196 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
MSH5O43196 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
MSH5O43196 AC004925.1-201ENST00000624256 2706 ntBASIC8.79□□□□□ -1
MSH5O43196 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC8.79□□□□□ -1
MSH5O43196 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC8.79□□□□□ -1
MSH5O43196 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
MSH5O43196 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC8.79□□□□□ -1
MSH5O43196 RNU6-944P-201ENST00000364023 107 ntBASIC8.79□□□□□ -1
MSH5O43196 RN7SKP293-201ENST00000411389 296 ntBASIC8.79□□□□□ -1
MSH5O43196 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC8.79□□□□□ -1
MSH5O43196 SNRPBP1-201ENST00000443634 282 ntBASIC8.79□□□□□ -1
MSH5O43196 H2AFZP5-201ENST00000446960 382 ntBASIC8.79□□□□□ -1
MSH5O43196 RN7SL39P-201ENST00000462264 297 ntBASIC8.79□□□□□ -1
MSH5O43196 AC113410.1-201ENST00000505029 247 ntBASIC8.79□□□□□ -1
MSH5O43196 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
MSH5O43196 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
MSH5O43196 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
MSH5O43196 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
MSH5O43196 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC8.79□□□□□ -1
MSH5O43196 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC8.79□□□□□ -1
MSH5O43196 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
MSH5O43196 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
MSH5O43196 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms