Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.77□□□□□ -1.97
CDX4O14627 AC008443.7-201ENST00000622195 246 ntBASIC2.77□□□□□ -1.97
CDX4O14627 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.77□□□□□ -1.97
CDX4O14627 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDX4O14627 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.76□□□□□ -1.97
CDX4O14627 AL390237.1-201ENST00000404226 1415 ntBASIC2.76□□□□□ -1.97
CDX4O14627 AC092447.10-201ENST00000620607 1652 ntBASIC2.76□□□□□ -1.97
CDX4O14627 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CDX4O14627 RNU6-660P-201ENST00000364566 109 ntBASIC2.76□□□□□ -1.97
CDX4O14627 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDX4O14627 SNORD116-4-201ENST00000384733 96 ntBASIC2.76□□□□□ -1.97
CDX4O14627 AL138827.1-201ENST00000402666 306 ntBASIC2.76□□□□□ -1.97
CDX4O14627 RN7SKP266-201ENST00000410232 287 ntBASIC2.76□□□□□ -1.97
CDX4O14627 RNU2-47P-201ENST00000410649 186 ntBASIC2.76□□□□□ -1.97
CDX4O14627 TPMTP3-201ENST00000411928 735 ntBASIC2.76□□□□□ -1.97
CDX4O14627 RPL30P2-201ENST00000414021 291 ntBASIC2.76□□□□□ -1.97
CDX4O14627 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.76□□□□□ -1.97
CDX4O14627 YPEL5P1-201ENST00000419731 367 ntBASIC2.76□□□□□ -1.97
CDX4O14627 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.76□□□□□ -1.97
CDX4O14627 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.76□□□□□ -1.97
CDX4O14627 AC244035.1-201ENST00000430042 390 ntBASIC2.76□□□□□ -1.97
CDX4O14627 EEF1E1P1-201ENST00000446998 430 ntBASIC2.76□□□□□ -1.97
CDX4O14627 HMGB3P8-201ENST00000449709 577 ntBASIC2.76□□□□□ -1.97
CDX4O14627 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.76□□□□□ -1.97
CDX4O14627 KATNBL1P6-201ENST00000453433 915 ntBASIC2.76□□□□□ -1.97
CDX4O14627 ZNF114P1-201ENST00000453500 292 ntBASIC2.76□□□□□ -1.97
CDX4O14627 MTND1P9-201ENST00000453775 944 ntBASIC2.76□□□□□ -1.97
CDX4O14627 snoU13.15-201ENST00000459407 104 ntBASIC2.76□□□□□ -1.97
CDX4O14627 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.76□□□□□ -1.97
CDX4O14627 AC106872.3-201ENST00000495104 446 ntBASIC2.76□□□□□ -1.97
CDX4O14627 AC096751.1-202ENST00000502691 1067 ntBASIC2.76□□□□□ -1.97
CDX4O14627 RNA5SP148-201ENST00000516527 94 ntBASIC2.76□□□□□ -1.97
CDX4O14627 AC060788.1-201ENST00000521318 469 ntBASIC2.76□□□□□ -1.97
CDX4O14627 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.76□□□□□ -1.97
CDX4O14627 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.76□□□□□ -1.97
CDX4O14627 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.76□□□□□ -1.97
CDX4O14627 AC024909.2-201ENST00000553035 286 ntBASIC2.76□□□□□ -1.97
CDX4O14627 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.76□□□□□ -1.97
CDX4O14627 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.76□□□□□ -1.97
CDX4O14627 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.76□□□□□ -1.97
CDX4O14627 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.76□□□□□ -1.97
CDX4O14627 AC136618.2-201ENST00000575091 400 ntBASIC2.76□□□□□ -1.97
CDX4O14627 AC024560.3-201ENST00000608482 349 ntBASIC2.76□□□□□ -1.97
CDX4O14627 AL158063.1-201ENST00000615349 536 ntBASIC2.76□□□□□ -1.97
CDX4O14627 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.76□□□□□ -1.97
CDX4O14627 MIR7153-201ENST00000637758 57 ntBASIC2.76□□□□□ -1.97
CDX4O14627 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.76□□□□□ -1.97
CDX4O14627 MTCO1P9-201ENST00000505577 1534 ntBASIC2.76□□□□□ -1.97
CDX4O14627 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.76□□□□□ -1.97
CDX4O14627 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.76□□□□□ -1.97
CDX4O14627 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.75□□□□□ -1.97
CDX4O14627 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.75□□□□□ -1.97
CDX4O14627 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CDX4O14627 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CDX4O14627 FRG1BP-201ENST00000278882 761 ntBASIC2.75□□□□□ -1.97
CDX4O14627 RNU6-289P-201ENST00000364093 107 ntBASIC2.75□□□□□ -1.97
CDX4O14627 RNU6-744P-201ENST00000365557 107 ntBASIC2.75□□□□□ -1.97
CDX4O14627 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.75□□□□□ -1.97
CDX4O14627 RNU6-1316P-201ENST00000384242 108 ntBASIC2.75□□□□□ -1.97
CDX4O14627 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CDX4O14627 EI24P2-201ENST00000397776 1076 ntBASIC2.75□□□□□ -1.97
CDX4O14627 AL356421.1-201ENST00000403255 413 ntBASIC2.75□□□□□ -1.97
CDX4O14627 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.75□□□□□ -1.97
CDX4O14627 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDX4O14627 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX4O14627 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX4O14627 MTCYBP45-201ENST00000435243 565 ntBASIC2.75□□□□□ -1.97
CDX4O14627 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX4O14627 MTCO1P27-201ENST00000448269 226 ntBASIC2.75□□□□□ -1.97
CDX4O14627 MTCO2P18-201ENST00000457151 658 ntBASIC2.75□□□□□ -1.97
CDX4O14627 AC004801.2-202ENST00000463559 283 ntBASIC2.75□□□□□ -1.97
CDX4O14627 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX4O14627 AC034222.1-201ENST00000494052 532 ntBASIC2.75□□□□□ -1.97
CDX4O14627 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.75□□□□□ -1.97
CDX4O14627 ANXA2P1-201ENST00000505539 926 ntBASIC2.75□□□□□ -1.97
CDX4O14627 AC010424.1-201ENST00000506336 297 ntBASIC2.75□□□□□ -1.97
CDX4O14627 POU5F1P7-201ENST00000508759 541 ntBASIC2.75□□□□□ -1.97
CDX4O14627 AC091965.2-201ENST00000512324 613 ntBASIC2.75□□□□□ -1.97
CDX4O14627 ARL2BPP6-201ENST00000512757 439 ntBASIC2.75□□□□□ -1.97
CDX4O14627 RNU1-61P-201ENST00000516107 151 ntBASIC2.75□□□□□ -1.97
CDX4O14627 RNU6-714P-201ENST00000516963 103 ntBASIC2.75□□□□□ -1.97
CDX4O14627 RN7SKP60-201ENST00000516985 239 ntBASIC2.75□□□□□ -1.97
CDX4O14627 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX4O14627 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.75□□□□□ -1.97
CDX4O14627 AC106038.2-201ENST00000520706 568 ntBASIC2.75□□□□□ -1.97
CDX4O14627 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX4O14627 AP001646.1-201ENST00000527936 915 ntBASIC2.75□□□□□ -1.97
CDX4O14627 AP000873.5-201ENST00000533906 236 ntBASIC2.75□□□□□ -1.97
CDX4O14627 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX4O14627 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX4O14627 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX4O14627 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX4O14627 U73023.1-201ENST00000603134 700 ntBASIC2.75□□□□□ -1.97
CDX4O14627 MTCYBP22-201ENST00000603788 447 ntBASIC2.75□□□□□ -1.97
CDX4O14627 AC064872.1-201ENST00000604823 1072 ntBASIC2.75□□□□□ -1.97
CDX4O14627 AC103591.3-201ENST00000608684 209 ntBASIC2.75□□□□□ -1.97
CDX4O14627 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.75□□□□□ -1.97
CDX4O14627 AC122108.2-201ENST00000611946 526 ntBASIC2.75□□□□□ -1.97
CDX4O14627 HULC.1-201ENST00000612720 240 ntBASIC2.75□□□□□ -1.97
CDX4O14627 AL390240.1-201ENST00000612950 384 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms