Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MIR5571-201ENST00000577998 113 ntBASIC0.76□□□□□ -2.29
LINC01549A6NIU2 AC005229.3-201ENST00000603438 323 ntBASIC0.76□□□□□ -2.29
LINC01549A6NIU2 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC0.76□□□□□ -2.29
LINC01549A6NIU2 LINC02211-204ENST00000642024 1070 ntBASIC0.76□□□□□ -2.29
LINC01549A6NIU2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 RNU1-72P-201ENST00000362976 153 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 RNU6-837P-201ENST00000391056 108 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 UBE2V1P2-201ENST00000397758 440 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 AC093106.2-201ENST00000428212 385 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 AL035407.1-201ENST00000429211 571 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 HMGB1P27-201ENST00000431429 603 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 ARPC3P1-201ENST00000437218 533 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 AC079448.1-201ENST00000449377 373 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 MTND2P8-201ENST00000450555 1025 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 Z82190.1-201ENST00000454534 490 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 RNU7-27P-201ENST00000459281 62 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 snoU13.3-201ENST00000459441 104 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 UBE2DNL-203ENST00000474922 222 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 TRBV1-201ENST00000476502 284 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 AC092902.1-201ENST00000486999 259 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 RPS27P23-201ENST00000487608 251 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 RPL36AP21-201ENST00000490372 323 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 RPS29P21-201ENST00000496272 170 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 AC021087.2-201ENST00000504656 1203 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 FAM206BP-201ENST00000510179 541 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 NPM1P52-201ENST00000518264 846 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 AC115085.1-201ENST00000588924 229 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 AC103810.8-201ENST00000607347 118 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 AC092140.2-201ENST00000618027 521 ntBASIC0.75□□□□□ -2.29
LINC01549A6NIU2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
LINC01549A6NIU2 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC0.74□□□□□ -2.29
LINC01549A6NIU2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
LINC01549A6NIU2 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.74□□□□□ -2.29
LINC01549A6NIU2 RNA5SP387-201ENST00000364226 106 ntBASIC0.74□□□□□ -2.29
LINC01549A6NIU2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.74□□□□□ -2.29
LINC01549A6NIU2 RNU6-338P-201ENST00000383888 105 ntBASIC0.74□□□□□ -2.29
LINC01549A6NIU2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
LINC01549A6NIU2 AL606490.8-201ENST00000441624 319 ntBASIC0.74□□□□□ -2.29
LINC01549A6NIU2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.74□□□□□ -2.29
LINC01549A6NIU2 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
LINC01549A6NIU2 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.74□□□□□ -2.29
LINC01549A6NIU2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC0.74□□□□□ -2.29
LINC01549A6NIU2 AP003497.1-201ENST00000528472 562 ntBASIC0.74□□□□□ -2.29
LINC01549A6NIU2 AC021749.1-201ENST00000604322 607 ntBASIC0.74□□□□□ -2.29
LINC01549A6NIU2 AL645939.4-201ENST00000604495 135 ntBASIC0.74□□□□□ -2.29
LINC01549A6NIU2 AC106900.2-201ENST00000604994 317 ntBASIC0.74□□□□□ -2.29
LINC01549A6NIU2 AL360181.4-201ENST00000621752 134 ntBASIC0.74□□□□□ -2.29
LINC01549A6NIU2 AP002791.1-201ENST00000623291 381 ntBASIC0.74□□□□□ -2.29
LINC01549A6NIU2 AP003400.5-201ENST00000624827 617 ntBASIC0.74□□□□□ -2.29
LINC01549A6NIU2 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
LINC01549A6NIU2 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LINC01549A6NIU2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LINC01549A6NIU2 SNORA70B-201ENST00000384210 135 ntBASIC0.73□□□□□ -2.29
LINC01549A6NIU2 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LINC01549A6NIU2 AL035405.1-201ENST00000400795 710 ntBASIC0.73□□□□□ -2.29
LINC01549A6NIU2 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.73□□□□□ -2.29
LINC01549A6NIU2 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.73□□□□□ -2.29
LINC01549A6NIU2 OR4K6P-201ENST00000416478 897 ntBASIC0.73□□□□□ -2.29
LINC01549A6NIU2 GDI2P2-201ENST00000445131 608 ntBASIC0.73□□□□□ -2.29
LINC01549A6NIU2 PTENP1-201ENST00000447117 1215 ntBASIC0.73□□□□□ -2.29
LINC01549A6NIU2 RPL39P29-201ENST00000447779 157 ntBASIC0.73□□□□□ -2.29
LINC01549A6NIU2 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.73□□□□□ -2.29
LINC01549A6NIU2 RPL30P12-201ENST00000474666 353 ntBASIC0.73□□□□□ -2.29
LINC01549A6NIU2 MLLT10P2-201ENST00000506434 249 ntBASIC0.73□□□□□ -2.29
LINC01549A6NIU2 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LINC01549A6NIU2 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.73□□□□□ -2.29
LINC01549A6NIU2 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC0.73□□□□□ -2.29
LINC01549A6NIU2 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.73□□□□□ -2.29
LINC01549A6NIU2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.73□□□□□ -2.29
LINC01549A6NIU2 AC107954.1-201ENST00000565906 727 ntBASIC0.73□□□□□ -2.29
LINC01549A6NIU2 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.73□□□□□ -2.29
LINC01549A6NIU2 AC004852.3-201ENST00000614131 326 ntBASIC0.73□□□□□ -2.29
LINC01549A6NIU2 uc_338.12-201ENST00000616344 181 ntBASIC0.73□□□□□ -2.29
LINC01549A6NIU2 PISRT1-201ENST00000626175 531 ntBASIC0.73□□□□□ -2.29
LINC01549A6NIU2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.73□□□□□ -2.29
LINC01549A6NIU2 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
LINC01549A6NIU2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.73□□□□□ -2.29
LINC01549A6NIU2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.73□□□□□ -2.29
LINC01549A6NIU2 MFSD8-213ENST00000641134 1327 ntBASIC0.72□□□□□ -2.29
LINC01549A6NIU2 RNU5D-1-201ENST00000363299 116 ntBASIC0.72□□□□□ -2.29
LINC01549A6NIU2 SNORA8-201ENST00000384574 139 ntBASIC0.72□□□□□ -2.29
LINC01549A6NIU2 AL031663.1-201ENST00000437445 219 ntBASIC0.72□□□□□ -2.29
LINC01549A6NIU2 RPL39P28-201ENST00000465655 155 ntBASIC0.72□□□□□ -2.29
LINC01549A6NIU2 MRPS33P3-201ENST00000513456 322 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms