Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 AC109446.1-201ENST00000566172 220 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 CYCSP40-201ENST00000575927 294 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 AC233702.9-201ENST00000581528 203 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 SNORD58B-201ENST00000607313 66 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 Mico1.1-201ENST00000611698 204 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 AL022401.1-201ENST00000619498 108 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 AL353748.2-201ENST00000622148 471 ntBASIC5□□□□□ -1.61
TRIM56Q9BRZ2 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM56Q9BRZ2 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 DDX18P3-201ENST00000404856 2007 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 SNURFL-201ENST00000309296 343 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 RPL23P2-201ENST00000320371 421 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 SNORA73.1-201ENST00000363107 205 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 RNU1-106P-201ENST00000384382 164 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 RNU6-1026P-201ENST00000384465 108 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 AL645733.1-201ENST00000402250 217 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 AL357515.1-201ENST00000402967 542 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 AC011933.1-201ENST00000413334 321 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 AC092809.3-201ENST00000415453 231 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 MTATP6P4-201ENST00000427725 675 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 AL353752.1-201ENST00000454946 260 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 CEACAMP4-201ENST00000457676 421 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 RPL9P32-201ENST00000464118 620 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 AC008571.1-201ENST00000467232 300 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 RPS18P6-201ENST00000476880 458 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 AC114801.2-201ENST00000503825 781 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 AC092436.3-201ENST00000511788 257 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 RNU6-408P-201ENST00000515910 100 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 RNU2-53P-201ENST00000516257 147 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 AC006272.2-201ENST00000594725 163 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 AC012119.1-201ENST00000603184 222 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 MIR8062-201ENST00000621515 85 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 MTND5P7-201ENST00000413558 1798 ntBASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
TRIM56Q9BRZ2 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 RNA5SP52-201ENST00000362448 134 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 RNU6-1059P-201ENST00000363752 98 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 Y_RNA.210-201ENST00000364161 110 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 Y_RNA.314-201ENST00000365114 102 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 RNA5SP455-201ENST00000365190 119 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 SNORD14.1-201ENST00000365609 90 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 Y_RNA.447-201ENST00000384184 113 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 Y_RNA.485-201ENST00000384395 102 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 MIR517A-201ENST00000385001 87 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 MIR550A3-201ENST00000390735 95 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 AC097374.1-203ENST00000400783 485 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 MIR1252-201ENST00000408861 65 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 AL354714.3-201ENST00000447284 493 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 RN7SL97P-201ENST00000486780 299 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 AC108145.1-201ENST00000503770 153 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 VN1R104P-201ENST00000505115 1009 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 RNU6-1143P-201ENST00000516125 104 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 HMGB3P26-201ENST00000560051 582 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 MIR5692A1-201ENST00000580523 69 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 MIR4691-201ENST00000583764 85 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 AL049539.1-201ENST00000611964 459 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 EIF3FP1-201ENST00000613970 806 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 MIR8069-1-201ENST00000616627 86 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 MIR8069-2-201ENST00000621412 86 ntBASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms