Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.87□□□□□ -1.63
RUFY4Q6ZNE9 FRG2DP-202ENST00000566967 323 ntBASIC4.87□□□□□ -1.63
RUFY4Q6ZNE9 AC079587.1-201ENST00000603846 277 ntBASIC4.87□□□□□ -1.63
RUFY4Q6ZNE9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.87□□□□□ -1.63
RUFY4Q6ZNE9 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.87□□□□□ -1.63
RUFY4Q6ZNE9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.87□□□□□ -1.63
RUFY4Q6ZNE9 MTND4P27-201ENST00000450813 1354 ntBASIC4.87□□□□□ -1.63
RUFY4Q6ZNE9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RUFY4Q6ZNE9 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RUFY4Q6ZNE9 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RUFY4Q6ZNE9 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.87□□□□□ -1.63
RUFY4Q6ZNE9 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.87□□□□□ -1.63
RUFY4Q6ZNE9 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RUFY4Q6ZNE9 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RUFY4Q6ZNE9 AL365440.1-201ENST00000436135 2167 ntBASIC4.87□□□□□ -1.63
RUFY4Q6ZNE9 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 Y_RNA.138-201ENST00000363462 102 ntBASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 RNU1-13P-201ENST00000384499 162 ntBASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 SNORA11F-201ENST00000408237 128 ntBASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 NEFMP1-201ENST00000443423 1006 ntBASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 Y_RNA.639-201ENST00000458981 102 ntBASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 RN7SL691P-201ENST00000494487 301 ntBASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 Y_RNA.682-201ENST00000516457 100 ntBASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 RNU6-566P-201ENST00000516790 107 ntBASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 RNU6-677P-201ENST00000516914 101 ntBASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 RN7SKP258-201ENST00000517151 304 ntBASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 AC090151.1-201ENST00000520784 730 ntBASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 MTCO3P23-201ENST00000561363 289 ntBASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 MIR3942-201ENST00000585264 109 ntBASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 SDR42E1P2-201ENST00000614861 481 ntBASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 AC140479.6-201ENST00000633535 357 ntBASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RUFY4Q6ZNE9 AC087190.4-201ENST00000574616 8334 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AL592182.3-201ENST00000642132 3304 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 MIR448-201ENST00000362131 111 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 RNU6-254P-201ENST00000363377 107 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 RNA5SP151-201ENST00000365632 117 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 RNU6-76P-201ENST00000384060 104 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 RNU6-43P-201ENST00000384302 107 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 RNU6-817P-201ENST00000391083 104 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 MTCYBP4-201ENST00000401524 249 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 RN7SKP158-201ENST00000410453 326 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 SSXP9-201ENST00000417503 292 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 RPS3AP52-201ENST00000435639 297 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AC104058.1-201ENST00000448028 297 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AL359073.1-201ENST00000448036 403 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 FABP5P13-201ENST00000452144 328 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 RNU6-953P-201ENST00000459154 107 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 RPL21P93-201ENST00000480465 489 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 RPS27AP13-201ENST00000498403 237 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AC108145.1-201ENST00000503770 153 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 PPBPP1-201ENST00000510807 373 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 AC008958.1-201ENST00000511047 682 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 RNA5SP497-201ENST00000516081 97 ntBASIC4.85□□□□□ -1.63
RUFY4Q6ZNE9 RNU6-123P-201ENST00000516163 102 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms