Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.56□□□□□ -1.36
PRIM1P49642 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PRIM1P49642 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
PRIM1P49642 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.56□□□□□ -1.36
PRIM1P49642 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
PRIM1P49642 RNU6-288P-201ENST00000363690 104 ntBASIC6.56□□□□□ -1.36
PRIM1P49642 RNU6-682P-201ENST00000363843 106 ntBASIC6.56□□□□□ -1.36
PRIM1P49642 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PRIM1P49642 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
PRIM1P49642 U3.22-201ENST00000391120 215 ntBASIC6.56□□□□□ -1.36
PRIM1P49642 MIR298-201ENST00000401212 88 ntBASIC6.56□□□□□ -1.36
PRIM1P49642 AL033519.2-201ENST00000403958 392 ntBASIC6.56□□□□□ -1.36
PRIM1P49642 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.56□□□□□ -1.36
PRIM1P49642 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC6.56□□□□□ -1.36
PRIM1P49642 SETP5-201ENST00000437270 562 ntBASIC6.56□□□□□ -1.36
PRIM1P49642 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.56□□□□□ -1.36
PRIM1P49642 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
PRIM1P49642 HMGB1P25-201ENST00000468402 607 ntBASIC6.56□□□□□ -1.36
PRIM1P49642 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.56□□□□□ -1.36
PRIM1P49642 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.56□□□□□ -1.36
PRIM1P49642 SNRPGP16-201ENST00000533275 226 ntBASIC6.56□□□□□ -1.36
PRIM1P49642 AC010186.2-204ENST00000537668 439 ntBASIC6.56□□□□□ -1.36
PRIM1P49642 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC6.56□□□□□ -1.36
PRIM1P49642 RN7SL652P-201ENST00000577769 300 ntBASIC6.56□□□□□ -1.36
PRIM1P49642 AC022884.2-201ENST00000578535 580 ntBASIC6.56□□□□□ -1.36
PRIM1P49642 PRPF19P1-201ENST00000584766 898 ntBASIC6.56□□□□□ -1.36
PRIM1P49642 AL139124.1-201ENST00000609123 421 ntBASIC6.56□□□□□ -1.36
PRIM1P49642 AC004852.3-201ENST00000614131 326 ntBASIC6.56□□□□□ -1.36
PRIM1P49642 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PRIM1P49642 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
PRIM1P49642 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PRIM1P49642 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
PRIM1P49642 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PRIM1P49642 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
PRIM1P49642 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PRIM1P49642 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.56□□□□□ -1.36
PRIM1P49642 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PRIM1P49642 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PRIM1P49642 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PRIM1P49642 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PRIM1P49642 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.55□□□□□ -1.36
PRIM1P49642 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PRIM1P49642 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PRIM1P49642 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
PRIM1P49642 RPL9P7-201ENST00000330965 580 ntBASIC6.55□□□□□ -1.36
PRIM1P49642 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PRIM1P49642 ELOCP18-201ENST00000434209 337 ntBASIC6.55□□□□□ -1.36
PRIM1P49642 AL513043.1-201ENST00000439124 535 ntBASIC6.55□□□□□ -1.36
PRIM1P49642 AL360271.2-201ENST00000447710 161 ntBASIC6.55□□□□□ -1.36
PRIM1P49642 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC6.55□□□□□ -1.36
PRIM1P49642 ABCC13-202ENST00000463099 3842 ntBASIC6.55□□□□□ -1.36
PRIM1P49642 RPL9P9-202ENST00000466501 579 ntBASIC6.55□□□□□ -1.36
PRIM1P49642 RPS27AP13-201ENST00000498403 237 ntBASIC6.55□□□□□ -1.36
PRIM1P49642 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.55□□□□□ -1.36
PRIM1P49642 SYF2P1-201ENST00000550658 413 ntBASIC6.55□□□□□ -1.36
PRIM1P49642 AC005951.2-201ENST00000576282 495 ntBASIC6.55□□□□□ -1.36
PRIM1P49642 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC6.55□□□□□ -1.36
PRIM1P49642 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.55□□□□□ -1.36
PRIM1P49642 AC098826.3-201ENST00000603823 466 ntBASIC6.55□□□□□ -1.36
PRIM1P49642 MIR8076-201ENST00000611401 83 ntBASIC6.55□□□□□ -1.36
PRIM1P49642 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
PRIM1P49642 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.55□□□□□ -1.36
PRIM1P49642 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PRIM1P49642 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PRIM1P49642 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.55□□□□□ -1.36
PRIM1P49642 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.55□□□□□ -1.36
PRIM1P49642 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
PRIM1P49642 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PRIM1P49642 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.54□□□□□ -1.36
PRIM1P49642 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PRIM1P49642 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
PRIM1P49642 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PRIM1P49642 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
PRIM1P49642 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
PRIM1P49642 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PRIM1P49642 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PRIM1P49642 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PRIM1P49642 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.54□□□□□ -1.36
PRIM1P49642 RNU6-1020P-201ENST00000363684 107 ntBASIC6.54□□□□□ -1.36
PRIM1P49642 RNA5SP479-201ENST00000364858 117 ntBASIC6.54□□□□□ -1.36
PRIM1P49642 Y_RNA.304-201ENST00000365011 112 ntBASIC6.54□□□□□ -1.36
PRIM1P49642 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PRIM1P49642 RNY3P4-201ENST00000384428 101 ntBASIC6.54□□□□□ -1.36
PRIM1P49642 COX6CP10-201ENST00000416832 224 ntBASIC6.54□□□□□ -1.36
PRIM1P49642 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.54□□□□□ -1.36
PRIM1P49642 MTCO1P5-201ENST00000433573 344 ntBASIC6.54□□□□□ -1.36
PRIM1P49642 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.54□□□□□ -1.36
PRIM1P49642 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.54□□□□□ -1.36
PRIM1P49642 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC6.54□□□□□ -1.36
PRIM1P49642 RNU6-914P-201ENST00000516749 109 ntBASIC6.54□□□□□ -1.36
PRIM1P49642 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC6.54□□□□□ -1.36
PRIM1P49642 MIR4277-201ENST00000578298 84 ntBASIC6.54□□□□□ -1.36
PRIM1P49642 MIR4715-201ENST00000584117 79 ntBASIC6.54□□□□□ -1.36
PRIM1P49642 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.54□□□□□ -1.36
PRIM1P49642 RMST_4.1-201ENST00000616886 107 ntBASIC6.54□□□□□ -1.36
PRIM1P49642 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
PRIM1P49642 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
PRIM1P49642 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PRIM1P49642 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PRIM1P49642 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms