Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.05□□□□□ -1.76
C1RP00736 AC010587.1-201ENST00000505809 469 ntBASIC4.05□□□□□ -1.76
C1RP00736 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.05□□□□□ -1.76
C1RP00736 AC107934.1-201ENST00000522215 217 ntBASIC4.05□□□□□ -1.76
C1RP00736 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.05□□□□□ -1.76
C1RP00736 DEFB109D-201ENST00000529497 240 ntBASIC4.05□□□□□ -1.76
C1RP00736 AC087241.2-201ENST00000535801 324 ntBASIC4.05□□□□□ -1.76
C1RP00736 AC093012.1-202ENST00000549403 582 ntBASIC4.05□□□□□ -1.76
C1RP00736 DNAJC8P1-201ENST00000554535 372 ntBASIC4.05□□□□□ -1.76
C1RP00736 AL355836.1-201ENST00000555951 870 ntBASIC4.05□□□□□ -1.76
C1RP00736 AC099489.2-201ENST00000574976 260 ntBASIC4.05□□□□□ -1.76
C1RP00736 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.05□□□□□ -1.76
C1RP00736 AC011468.4-201ENST00000603942 409 ntBASIC4.05□□□□□ -1.76
C1RP00736 AL355472.4-201ENST00000610233 626 ntBASIC4.05□□□□□ -1.76
C1RP00736 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.05□□□□□ -1.76
C1RP00736 AC009161.2-201ENST00000624626 138 ntBASIC4.05□□□□□ -1.76
C1RP00736 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.05□□□□□ -1.76
C1RP00736 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
C1RP00736 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
C1RP00736 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
C1RP00736 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
C1RP00736 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
C1RP00736 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
C1RP00736 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.04□□□□□ -1.76
C1RP00736 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
C1RP00736 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
C1RP00736 MTND4P27-201ENST00000450813 1354 ntBASIC4.04□□□□□ -1.76
C1RP00736 ZNF33CP-201ENST00000432492 2030 ntBASIC4.04□□□□□ -1.76
C1RP00736 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
C1RP00736 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.04□□□□□ -1.76
C1RP00736 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.04□□□□□ -1.76
C1RP00736 Y_RNA.144-201ENST00000363521 113 ntBASIC4.04□□□□□ -1.76
C1RP00736 SNORA20.2-201ENST00000383922 131 ntBASIC4.04□□□□□ -1.76
C1RP00736 Y_RNA.431-201ENST00000384086 102 ntBASIC4.04□□□□□ -1.76
C1RP00736 SNORA9-201ENST00000384215 133 ntBASIC4.04□□□□□ -1.76
C1RP00736 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
C1RP00736 ATP5A1P2-201ENST00000412323 255 ntBASIC4.04□□□□□ -1.76
C1RP00736 MTND3P8-201ENST00000412909 339 ntBASIC4.04□□□□□ -1.76
C1RP00736 MTND3P2-201ENST00000438452 342 ntBASIC4.04□□□□□ -1.76
C1RP00736 HMGB1P18-201ENST00000438801 619 ntBASIC4.04□□□□□ -1.76
C1RP00736 AC108734.1-201ENST00000439549 399 ntBASIC4.04□□□□□ -1.76
C1RP00736 PRDX3P3-201ENST00000447765 522 ntBASIC4.04□□□□□ -1.76
C1RP00736 SNORD19B-201ENST00000459623 84 ntBASIC4.04□□□□□ -1.76
C1RP00736 AC021382.1-201ENST00000483523 359 ntBASIC4.04□□□□□ -1.76
C1RP00736 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.04□□□□□ -1.76
C1RP00736 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.04□□□□□ -1.76
C1RP00736 RNU4-49P-201ENST00000516080 140 ntBASIC4.04□□□□□ -1.76
C1RP00736 NARSP2-201ENST00000518524 679 ntBASIC4.04□□□□□ -1.76
C1RP00736 AP003497.1-201ENST00000528472 562 ntBASIC4.04□□□□□ -1.76
C1RP00736 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.04□□□□□ -1.76
C1RP00736 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
C1RP00736 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.04□□□□□ -1.76
C1RP00736 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.04□□□□□ -1.76
C1RP00736 AL355812.1-201ENST00000603215 216 ntBASIC4.04□□□□□ -1.76
C1RP00736 U3.45-201ENST00000607547 219 ntBASIC4.04□□□□□ -1.76
C1RP00736 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.04□□□□□ -1.76
C1RP00736 BX664608.1-201ENST00000610519 487 ntBASIC4.04□□□□□ -1.76
C1RP00736 AC105429.2-201ENST00000610567 517 ntBASIC4.04□□□□□ -1.76
C1RP00736 AC006329.2-201ENST00000611491 394 ntBASIC4.04□□□□□ -1.76
C1RP00736 AL158196.1-201ENST00000616786 434 ntBASIC4.04□□□□□ -1.76
C1RP00736 AC040168.1-201ENST00000623594 991 ntBASIC4.04□□□□□ -1.76
C1RP00736 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.04□□□□□ -1.76
C1RP00736 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.04□□□□□ -1.76
C1RP00736 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.04□□□□□ -1.76
C1RP00736 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.04□□□□□ -1.76
C1RP00736 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
C1RP00736 AL356274.2-201ENST00000624379 3752 ntBASIC4.04□□□□□ -1.76
C1RP00736 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
C1RP00736 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.03□□□□□ -1.76
C1RP00736 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
C1RP00736 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
C1RP00736 AC073346.2-201ENST00000624724 2058 ntBASIC4.03□□□□□ -1.76
C1RP00736 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
C1RP00736 RNU6-989P-201ENST00000362756 107 ntBASIC4.03□□□□□ -1.76
C1RP00736 Y_RNA.146-201ENST00000363549 102 ntBASIC4.03□□□□□ -1.76
C1RP00736 RNA5SP387-201ENST00000364226 106 ntBASIC4.03□□□□□ -1.76
C1RP00736 Y_RNA.231-201ENST00000364358 102 ntBASIC4.03□□□□□ -1.76
C1RP00736 Y_RNA.333-201ENST00000365274 102 ntBASIC4.03□□□□□ -1.76
C1RP00736 RNU6-1160P-201ENST00000384546 104 ntBASIC4.03□□□□□ -1.76
C1RP00736 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
C1RP00736 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
C1RP00736 MRPL42P2-201ENST00000403169 426 ntBASIC4.03□□□□□ -1.76
C1RP00736 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.03□□□□□ -1.76
C1RP00736 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.03□□□□□ -1.76
C1RP00736 AC092832.1-201ENST00000422934 400 ntBASIC4.03□□□□□ -1.76
C1RP00736 AP000907.1-201ENST00000428428 510 ntBASIC4.03□□□□□ -1.76
C1RP00736 CYCSP4-201ENST00000429682 331 ntBASIC4.03□□□□□ -1.76
C1RP00736 HMGN2P31-201ENST00000432430 273 ntBASIC4.03□□□□□ -1.76
C1RP00736 HSPD1P21-201ENST00000436541 245 ntBASIC4.03□□□□□ -1.76
C1RP00736 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.03□□□□□ -1.76
C1RP00736 IFNA20P-201ENST00000436840 528 ntBASIC4.03□□□□□ -1.76
C1RP00736 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.03□□□□□ -1.76
C1RP00736 AL049734.2-201ENST00000441066 616 ntBASIC4.03□□□□□ -1.76
C1RP00736 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.03□□□□□ -1.76
C1RP00736 AC006480.1-201ENST00000449887 378 ntBASIC4.03□□□□□ -1.76
C1RP00736 snoU13.24-201ENST00000458998 104 ntBASIC4.03□□□□□ -1.76
C1RP00736 MRPS17P3-201ENST00000465453 385 ntBASIC4.03□□□□□ -1.76
C1RP00736 RPL7P49-201ENST00000471402 708 ntBASIC4.03□□□□□ -1.76
C1RP00736 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.03□□□□□ -1.76
C1RP00736 AC106872.2-201ENST00000494303 480 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms