Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CDC42P4-201ENST00000510507 563 ntBASIC2.05□□□□□ -2.08
CHD1O14646 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.05□□□□□ -2.08
CHD1O14646 AC019131.2-201ENST00000609071 870 ntBASIC2.05□□□□□ -2.08
CHD1O14646 AC068700.1-201ENST00000565862 3754 ntBASIC2.04□□□□□ -2.08
CHD1O14646 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHD1O14646 AC098592.2-201ENST00000413158 265 ntBASIC2.04□□□□□ -2.08
CHD1O14646 HMGN2P19-201ENST00000425149 265 ntBASIC2.04□□□□□ -2.08
CHD1O14646 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.04□□□□□ -2.08
CHD1O14646 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.04□□□□□ -2.08
CHD1O14646 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHD1O14646 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.04□□□□□ -2.08
CHD1O14646 SNRPGP15-201ENST00000600149 222 ntBASIC2.04□□□□□ -2.08
CHD1O14646 AL390240.1-201ENST00000612950 384 ntBASIC2.04□□□□□ -2.08
CHD1O14646 RNF6P1-201ENST00000444889 1784 ntBASIC2.04□□□□□ -2.08
CHD1O14646 RNU6-1331P-201ENST00000363658 106 ntBASIC2.03□□□□□ -2.08
CHD1O14646 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CHD1O14646 AC244098.2-201ENST00000422068 99 ntBASIC2.03□□□□□ -2.08
CHD1O14646 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CHD1O14646 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CHD1O14646 AC022493.1-201ENST00000492984 337 ntBASIC2.03□□□□□ -2.08
CHD1O14646 AC021087.2-201ENST00000504656 1203 ntBASIC2.03□□□□□ -2.08
CHD1O14646 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.03□□□□□ -2.08
CHD1O14646 AC068831.7-201ENST00000616954 363 ntBASIC2.03□□□□□ -2.08
CHD1O14646 AC098657.3-201ENST00000620434 263 ntBASIC2.03□□□□□ -2.08
CHD1O14646 AP003072.4-201ENST00000624580 310 ntBASIC2.03□□□□□ -2.08
CHD1O14646 MIR373-201ENST00000362273 69 ntBASIC2.03□□□□□ -2.09
CHD1O14646 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.03□□□□□ -2.09
CHD1O14646 RNU4-65P-201ENST00000410473 140 ntBASIC2.03□□□□□ -2.09
CHD1O14646 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.03□□□□□ -2.09
CHD1O14646 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.09
CHD1O14646 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.03□□□□□ -2.09
CHD1O14646 RNA5SP468-201ENST00000516782 93 ntBASIC2.03□□□□□ -2.09
CHD1O14646 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.09
CHD1O14646 AC010928.2-201ENST00000588017 287 ntBASIC2.03□□□□□ -2.09
CHD1O14646 AC243773.3-201ENST00000613270 256 ntBASIC2.03□□□□□ -2.09
CHD1O14646 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
CHD1O14646 AL449363.1-201ENST00000617815 186 ntBASIC2.03□□□□□ -2.09
CHD1O14646 AC008133.2-201ENST00000624540 351 ntBASIC2.03□□□□□ -2.09
CHD1O14646 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.02□□□□□ -2.09
CHD1O14646 AL355497.1-201ENST00000406262 551 ntBASIC2.02□□□□□ -2.09
CHD1O14646 AC073264.1-201ENST00000411508 416 ntBASIC2.02□□□□□ -2.09
CHD1O14646 ARL5AP2-201ENST00000444698 533 ntBASIC2.02□□□□□ -2.09
CHD1O14646 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.02□□□□□ -2.09
CHD1O14646 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CHD1O14646 RNU6-113P-201ENST00000516653 101 ntBASIC2.02□□□□□ -2.09
CHD1O14646 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.02□□□□□ -2.09
CHD1O14646 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHD1O14646 RNU2-40P-201ENST00000410833 196 ntBASIC2.01□□□□□ -2.09
CHD1O14646 AL030996.1-201ENST00000411430 235 ntBASIC2.01□□□□□ -2.09
CHD1O14646 Z75741.2-201ENST00000417272 1167 ntBASIC2.01□□□□□ -2.09
CHD1O14646 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.01□□□□□ -2.09
CHD1O14646 AC096632.1-201ENST00000427395 310 ntBASIC2.01□□□□□ -2.09
CHD1O14646 MTATP6P4-201ENST00000427725 675 ntBASIC2.01□□□□□ -2.09
CHD1O14646 SNRPEP4-201ENST00000435815 279 ntBASIC2.01□□□□□ -2.09
CHD1O14646 AL354685.2-201ENST00000448218 1447 ntBASIC2.01□□□□□ -2.09
CHD1O14646 AL139109.1-201ENST00000455491 297 ntBASIC2.01□□□□□ -2.09
CHD1O14646 RNA5SP476-201ENST00000516613 103 ntBASIC2.01□□□□□ -2.09
CHD1O14646 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.01□□□□□ -2.09
CHD1O14646 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CHD1O14646 AC079597.1-201ENST00000624306 508 ntBASIC2.01□□□□□ -2.09
CHD1O14646 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CHD1O14646 SGO1P2-201ENST00000429458 1589 ntBASIC2□□□□□ -2.09
CHD1O14646 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2□□□□□ -2.09
CHD1O14646 RNA5SP139-201ENST00000364340 117 ntBASIC2□□□□□ -2.09
CHD1O14646 RNU6-203P-201ENST00000384038 104 ntBASIC2□□□□□ -2.09
CHD1O14646 MIR524-201ENST00000385242 87 ntBASIC2□□□□□ -2.09
CHD1O14646 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2□□□□□ -2.09
CHD1O14646 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2□□□□□ -2.09
CHD1O14646 RNU1-104P-201ENST00000517280 175 ntBASIC2□□□□□ -2.09
CHD1O14646 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2□□□□□ -2.09
CHD1O14646 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
CHD1O14646 AC068338.1-201ENST00000565567 176 ntBASIC2□□□□□ -2.09
CHD1O14646 uc_338.20-201ENST00000621563 178 ntBASIC2□□□□□ -2.09
CHD1O14646 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2□□□□□ -2.09
CHD1O14646 AL445305.1-201ENST00000432577 575 ntBASIC2□□□□□ -2.09
CHD1O14646 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2□□□□□ -2.09
CHD1O14646 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2□□□□□ -2.09
CHD1O14646 AC087808.1-201ENST00000520501 361 ntBASIC2□□□□□ -2.09
CHD1O14646 AC073413.2-201ENST00000604332 360 ntBASIC2□□□□□ -2.09
CHD1O14646 AC245884.12-201ENST00000615364 59 ntBASIC2□□□□□ -2.09
CHD1O14646 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2□□□□□ -2.09
CHD1O14646 MIR4496-201ENST00000635896 61 ntBASIC2□□□□□ -2.09
CHD1O14646 AC090740.1-201ENST00000623193 2262 ntBASIC1.99□□□□□ -2.09
CHD1O14646 RNU4-91P-201ENST00000364778 135 ntBASIC1.99□□□□□ -2.09
CHD1O14646 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.99□□□□□ -2.09
CHD1O14646 RNU6-1105P-201ENST00000384774 107 ntBASIC1.99□□□□□ -2.09
CHD1O14646 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.99□□□□□ -2.09
CHD1O14646 AL445687.1-201ENST00000439946 251 ntBASIC1.99□□□□□ -2.09
CHD1O14646 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CHD1O14646 AC093281.2-201ENST00000510153 597 ntBASIC1.99□□□□□ -2.09
CHD1O14646 AL138976.2-201ENST00000563989 694 ntBASIC1.99□□□□□ -2.09
CHD1O14646 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.99□□□□□ -2.09
CHD1O14646 AL445493.3-201ENST00000619568 477 ntBASIC1.99□□□□□ -2.09
CHD1O14646 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.99□□□□□ -2.09
CHD1O14646 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.99□□□□□ -2.09
CHD1O14646 AC073055.1-201ENST00000456901 1621 ntBASIC1.98□□□□□ -2.09
CHD1O14646 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CHD1O14646 RNU4-72P-201ENST00000410754 173 ntBASIC1.98□□□□□ -2.09
CHD1O14646 RPS3AP44-201ENST00000425466 790 ntBASIC1.98□□□□□ -2.09
CHD1O14646 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms