Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 RPL39P5-202ENST00000512505 151 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 RNA5SP497-201ENST00000516081 97 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 RNU6-566P-201ENST00000516790 107 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 RNU6-352P-201ENST00000516908 107 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 RN7SKP60-201ENST00000516985 239 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 Y_RNA.718-201ENST00000517110 102 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 SNORA31.22-201ENST00000517204 135 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AC135001.1-201ENST00000544546 283 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AC020661.2-201ENST00000560114 134 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AC006116.10-201ENST00000591836 581 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AC079587.1-201ENST00000603846 277 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AC104763.2-201ENST00000604179 382 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AL670379.10-201ENST00000604330 253 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AL670379.9-201ENST00000605428 253 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AC103705.1-201ENST00000619013 241 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AL353748.2-201ENST00000622148 471 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 MIR4275-201ENST00000636486 87 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 AL133243.3-201ENST00000617415 3004 ntBASIC4.19□□□□□ -1.74
KCMF1Q9P0J7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 MTND4P27-201ENST00000450813 1354 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 AC025031.4-201ENST00000621248 3271 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 RPL32P3-201ENST00000359025 275 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 RNU1-108P-201ENST00000362556 161 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 RNU6-254P-201ENST00000363377 107 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 RNU6-288P-201ENST00000363690 104 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 RNU6-76P-201ENST00000384060 104 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 SNORD116-29-201ENST00000384516 83 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 SNORA16.2-201ENST00000390991 127 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 ELOCP19-201ENST00000411919 318 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 RPL37P10-201ENST00000412884 288 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 AL732292.1-201ENST00000426692 226 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 GTF2IP13-201ENST00000438487 386 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 DYNLL1P5-201ENST00000467158 270 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 AC027575.1-201ENST00000481064 460 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 GMPSP1-201ENST00000514075 579 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 RN7SKP24-201ENST00000515888 284 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 RNU6-677P-201ENST00000516914 101 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 IGLVIV-65-201ENST00000517313 360 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 RPL23AP97-201ENST00000568955 471 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 AL356218.2-201ENST00000605264 187 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 U2.17-201ENST00000611454 95 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 AL359547.2-201ENST00000615810 418 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 AL445363.3-201ENST00000623080 671 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 AC134503.1-201ENST00000633048 54 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 OR52H1-202ENST00000641796 1061 ntBASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
KCMF1Q9P0J7 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 MIR369-201ENST00000362155 70 ntBASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 SNORA62-201ENST00000365493 153 ntBASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 RNU1-44P-201ENST00000384453 163 ntBASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 RNU6-393P-201ENST00000384475 107 ntBASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 RNY4P36-201ENST00000391116 96 ntBASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 LAP3P1-201ENST00000403648 294 ntBASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 AC079780.1-201ENST00000428259 207 ntBASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 RPL23AP89-201ENST00000439324 255 ntBASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 AC093840.1-201ENST00000511599 336 ntBASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.17□□□□□ -1.74
KCMF1Q9P0J7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms