Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
RNF139Q8WU17 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.7□□□□□ -1.98
RNF139Q8WU17 AL391261.3-201ENST00000557194 520 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.7□□□□□ -1.98
RNF139Q8WU17 AC009163.5-201ENST00000575421 637 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.7□□□□□ -1.98
RNF139Q8WU17 VN1R78P-201ENST00000597393 564 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.7□□□□□ -1.98
RNF139Q8WU17 AP003485.1-201ENST00000625093 753 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.7□□□□□ -1.98
RNF139Q8WU17 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.7□□□□□ -1.98
RNF139Q8WU17 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RNF139Q8WU17 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RNF139Q8WU17 RNA5SP68-201ENST00000363885 119 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 RNU1-100P-201ENST00000365255 165 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 Y_RNA.500-201ENST00000384466 111 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 MTCO1P56-201ENST00000401674 224 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 DHFRP6-201ENST00000401776 268 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 AC069282.1-201ENST00000411911 526 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF139Q8WU17 AC236972.1-201ENST00000433225 199 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF139Q8WU17 ST13P20-201ENST00000447996 1065 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF139Q8WU17 UBE2DNL-203ENST00000474922 222 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 AC126389.1-201ENST00000477436 290 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 NDUFB4P2-201ENST00000509515 391 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RNF139Q8WU17 AC112206.4-201ENST00000515142 405 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 RNU1-104P-201ENST00000517280 175 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF139Q8WU17 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF139Q8WU17 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.69□□□□□ -1.98
RNF139Q8WU17 AC087897.1-201ENST00000550134 156 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.69□□□□□ -1.98
RNF139Q8WU17 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF139Q8WU17 AC008507.2-201ENST00000588402 1176 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 AC103710.4-201ENST00000609301 899 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 AC008498.1-201ENST00000613012 531 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 MIR6817-201ENST00000615588 66 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.69□□□□□ -1.98
RNF139Q8WU17 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
RNF139Q8WU17 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RNF139Q8WU17 Z82195.2-201ENST00000612348 18351 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RNF139Q8WU17 AL359693.1-201ENST00000614959 2407 ntBASIC2.69□□□□□ -1.98
RNF139Q8WU17 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.68□□□□□ -1.98
RNF139Q8WU17 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF139Q8WU17 AC080100.1-201ENST00000624239 5356 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF139Q8WU17 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RNF139Q8WU17 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.68□□□□□ -1.98
RNF139Q8WU17 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF139Q8WU17 AC007435.1-201ENST00000421086 415 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.68□□□□□ -1.98
RNF139Q8WU17 MTCYBP45-201ENST00000435243 565 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 AC009961.3-201ENST00000449832 765 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 TRGVB-201ENST00000453257 471 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 SRIP1-201ENST00000489235 288 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 SUMO2P6-201ENST00000505273 288 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 RNU4-29P-201ENST00000515943 174 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 RNU6-840P-201ENST00000517275 65 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 HMGN1P28-201ENST00000521340 364 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.68□□□□□ -1.98
RNF139Q8WU17 NDUFS5P6-201ENST00000529136 295 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.68□□□□□ -1.98
RNF139Q8WU17 AC243972.3-201ENST00000539655 198 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 AC123904.3-201ENST00000547218 814 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 AC104072.1-201ENST00000568817 668 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 MIR3912-201ENST00000577566 105 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 MTCO3P13-201ENST00000577757 781 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 AC068620.3-201ENST00000602749 560 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 AL356280.1-201ENST00000603614 379 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 AC099785.1-201ENST00000605697 437 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 AC026790.2-201ENST00000606282 430 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.68□□□□□ -1.98
RNF139Q8WU17 BX664608.1-201ENST00000610519 487 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 AL138960.2-201ENST00000625145 535 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.68□□□□□ -1.98
RNF139Q8WU17 AC106858.1-201ENST00000637497 429 ntBASIC2.68□□□□□ -1.98
RNF139Q8WU17 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RNF139Q8WU17 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RNF139Q8WU17 AC010329.5-201ENST00000623497 2174 ntBASIC2.67□□□□□ -1.98
RNF139Q8WU17 AP005901.5-201ENST00000545779 1796 ntBASIC2.67□□□□□ -1.98
RNF139Q8WU17 RNU6-1257P-201ENST00000384625 110 ntBASIC2.67□□□□□ -1.98
RNF139Q8WU17 AL139095.1-201ENST00000404326 391 ntBASIC2.67□□□□□ -1.98
RNF139Q8WU17 RNU2-33P-201ENST00000410344 192 ntBASIC2.67□□□□□ -1.98
RNF139Q8WU17 RNU2-42P-201ENST00000410697 113 ntBASIC2.67□□□□□ -1.98
RNF139Q8WU17 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.67□□□□□ -1.98
RNF139Q8WU17 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.67□□□□□ -1.98
RNF139Q8WU17 AL139421.1-201ENST00000423010 169 ntBASIC2.67□□□□□ -1.98
RNF139Q8WU17 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.67□□□□□ -1.98
RNF139Q8WU17 UBE2V1P13-201ENST00000436983 439 ntBASIC2.67□□□□□ -1.98
RNF139Q8WU17 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.67□□□□□ -1.98
RNF139Q8WU17 AC104389.3-201ENST00000445629 235 ntBASIC2.67□□□□□ -1.98
RNF139Q8WU17 RBM43P1-201ENST00000476891 1081 ntBASIC2.67□□□□□ -1.98
RNF139Q8WU17 HMGB1P28-201ENST00000507778 552 ntBASIC2.67□□□□□ -1.98
RNF139Q8WU17 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.67□□□□□ -1.98
RNF139Q8WU17 AC114781.4-201ENST00000513707 639 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms