Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
VARS2Q5ST30 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.17□□□□□ -1.42
VARS2Q5ST30 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VARS2Q5ST30 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
VARS2Q5ST30 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VARS2Q5ST30 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC6.17□□□□□ -1.42
VARS2Q5ST30 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
VARS2Q5ST30 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VARS2Q5ST30 RNU6-384P-201ENST00000364900 104 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 RNU6-1145P-201ENST00000384246 107 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 RNU6-1152P-201ENST00000384576 107 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 RNU6-554P-201ENST00000410466 106 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 RNU6-1001P-201ENST00000411265 100 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 HMGB1P27-201ENST00000431429 603 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6.17□□□□□ -1.42
VARS2Q5ST30 AL158147.1-201ENST00000443970 75 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 RN7SL72P-201ENST00000460697 269 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 AC005912.1-201ENST00000495392 255 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC6.17□□□□□ -1.42
VARS2Q5ST30 RNU6-521P-201ENST00000516663 105 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.17□□□□□ -1.42
VARS2Q5ST30 AC103783.1-201ENST00000520506 373 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.17□□□□□ -1.42
VARS2Q5ST30 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
VARS2Q5ST30 CR383656.7-201ENST00000548164 174 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.17□□□□□ -1.42
VARS2Q5ST30 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC6.17□□□□□ -1.42
VARS2Q5ST30 AL139395.1-201ENST00000603662 160 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 RNU6-84P-201ENST00000607737 102 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 AL161629.2-201ENST00000615347 275 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 AC005296.1-201ENST00000616145 209 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.17□□□□□ -1.42
VARS2Q5ST30 AL121890.5-201ENST00000620848 304 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 AC092628.2-201ENST00000622492 339 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 CU639417.4-201ENST00000623928 207 ntBASIC6.17□□□□□ -1.42
VARS2Q5ST30 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VARS2Q5ST30 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.17□□□□□ -1.42
VARS2Q5ST30 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
VARS2Q5ST30 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VARS2Q5ST30 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
VARS2Q5ST30 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
VARS2Q5ST30 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
VARS2Q5ST30 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
VARS2Q5ST30 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.16□□□□□ -1.42
VARS2Q5ST30 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
VARS2Q5ST30 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VARS2Q5ST30 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VARS2Q5ST30 AL159987.1-201ENST00000347911 293 ntBASIC6.16□□□□□ -1.42
VARS2Q5ST30 RNU6-820P-201ENST00000384273 107 ntBASIC6.16□□□□□ -1.42
VARS2Q5ST30 MIR32-201ENST00000384965 70 ntBASIC6.16□□□□□ -1.42
VARS2Q5ST30 MIR329-1-201ENST00000385028 80 ntBASIC6.16□□□□□ -1.42
VARS2Q5ST30 MIR153-2-201ENST00000385225 87 ntBASIC6.16□□□□□ -1.42
VARS2Q5ST30 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VARS2Q5ST30 EDDM3CP-201ENST00000415977 425 ntBASIC6.16□□□□□ -1.42
VARS2Q5ST30 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.16□□□□□ -1.42
VARS2Q5ST30 AL714022.1-201ENST00000439897 151 ntBASIC6.16□□□□□ -1.42
VARS2Q5ST30 REG1CP-206ENST00000447469 496 ntBASIC6.16□□□□□ -1.42
VARS2Q5ST30 AC021678.3-201ENST00000517893 476 ntBASIC6.16□□□□□ -1.42
VARS2Q5ST30 HSPE1P4-201ENST00000550617 308 ntBASIC6.16□□□□□ -1.42
VARS2Q5ST30 AL049872.1-201ENST00000556323 322 ntBASIC6.16□□□□□ -1.42
VARS2Q5ST30 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.16□□□□□ -1.42
VARS2Q5ST30 MIR4433B-201ENST00000581329 102 ntBASIC6.16□□□□□ -1.42
VARS2Q5ST30 MIR6130-201ENST00000619419 109 ntBASIC6.16□□□□□ -1.42
VARS2Q5ST30 MFSD8-219ENST00000641228 2559 ntBASIC6.16□□□□□ -1.42
VARS2Q5ST30 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
VARS2Q5ST30 AC099654.2-201ENST00000433031 1980 ntBASIC6.16□□□□□ -1.42
VARS2Q5ST30 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VARS2Q5ST30 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
VARS2Q5ST30 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VARS2Q5ST30 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VARS2Q5ST30 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
VARS2Q5ST30 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VARS2Q5ST30 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VARS2Q5ST30 AC134026.1-201ENST00000623249 2239 ntBASIC6.15□□□□□ -1.42
VARS2Q5ST30 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
VARS2Q5ST30 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VARS2Q5ST30 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VARS2Q5ST30 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VARS2Q5ST30 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VARS2Q5ST30 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VARS2Q5ST30 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
VARS2Q5ST30 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VARS2Q5ST30 AL731532.1-201ENST00000623972 4236 ntBASIC6.15□□□□□ -1.42
VARS2Q5ST30 AL133482.1-201ENST00000415988 498 ntBASIC6.15□□□□□ -1.42
VARS2Q5ST30 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.15□□□□□ -1.42
VARS2Q5ST30 AC092017.2-201ENST00000427600 362 ntBASIC6.15□□□□□ -1.42
VARS2Q5ST30 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.15□□□□□ -1.42
VARS2Q5ST30 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.15□□□□□ -1.42
VARS2Q5ST30 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.15□□□□□ -1.42
VARS2Q5ST30 RPL23AP49-201ENST00000492925 468 ntBASIC6.15□□□□□ -1.42
VARS2Q5ST30 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.15□□□□□ -1.42
VARS2Q5ST30 BNIP3P5-201ENST00000562290 498 ntBASIC6.15□□□□□ -1.42
VARS2Q5ST30 MIR4782-201ENST00000577987 79 ntBASIC6.15□□□□□ -1.42
VARS2Q5ST30 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.15□□□□□ -1.42
VARS2Q5ST30 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.15□□□□□ -1.42
VARS2Q5ST30 AL034408.1-202ENST00000636088 415 ntBASIC6.15□□□□□ -1.42
VARS2Q5ST30 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
VARS2Q5ST30 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms