Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
EFNB1P98172 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
EFNB1P98172 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
EFNB1P98172 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
EFNB1P98172 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
EFNB1P98172 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB1P98172 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.36□□□□□ -1.87
EFNB1P98172 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB1P98172 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB1P98172 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.36□□□□□ -1.87
EFNB1P98172 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB1P98172 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB1P98172 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB1P98172 RNU6-1120P-201ENST00000362988 108 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 RNU6-1167P-201ENST00000363227 94 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 U1.1-201ENST00000384101 164 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 SNORA24.1-201ENST00000384401 135 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 SNORA1.3-201ENST00000384676 136 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 RNA5SP424-201ENST00000390988 115 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 MTCO3P40-201ENST00000392516 676 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 RPS26P8-201ENST00000393490 348 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
EFNB1P98172 AL590704.1-201ENST00000402856 794 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB1P98172 SNORA57.3-201ENST00000411095 141 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 AC114491.1-201ENST00000416095 246 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 AL356095.1-201ENST00000417217 199 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 DPPA2P1-201ENST00000428060 556 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 AC017083.1-201ENST00000428093 483 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 RPL23AP69-201ENST00000431134 458 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 OR2B8P-201ENST00000432841 938 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 NEK4P1-201ENST00000433383 879 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 AL512844.2-201ENST00000433990 593 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 RPS15AP9-201ENST00000439856 381 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.36□□□□□ -1.87
EFNB1P98172 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB1P98172 MRPS31P2-201ENST00000451581 518 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 RPS29P33-201ENST00000456717 146 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.36□□□□□ -1.87
EFNB1P98172 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.36□□□□□ -1.87
EFNB1P98172 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.36□□□□□ -1.87
EFNB1P98172 KC877373.1-201ENST00000479066 408 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 SNORD27.1-201ENST00000516319 72 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 RNU6-1282P-201ENST00000516735 96 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 OR5B19P-201ENST00000531766 928 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.36□□□□□ -1.87
EFNB1P98172 AC024619.4-201ENST00000580924 316 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.36□□□□□ -1.87
EFNB1P98172 AC025449.1-201ENST00000603896 529 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB1P98172 MIR6076-201ENST00000617521 113 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.36□□□□□ -1.87
EFNB1P98172 AL732372.2-225ENST00000642124 456 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB1P98172 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB1P98172 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB1P98172 MTND5P17-201ENST00000418405 1603 ntBASIC3.36□□□□□ -1.87
EFNB1P98172 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
EFNB1P98172 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
EFNB1P98172 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
EFNB1P98172 UBE2L2-201ENST00000254302 429 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
EFNB1P98172 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
EFNB1P98172 RNU6-179P-201ENST00000363350 107 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 RNU6-288P-201ENST00000363690 104 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 RNU6-190P-201ENST00000384154 102 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 MIR184-201ENST00000384962 84 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 MIR454-201ENST00000390180 115 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
EFNB1P98172 RPS4XP9-201ENST00000405151 780 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
EFNB1P98172 AL031779.1-201ENST00000415663 330 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 AC007390.1-201ENST00000415722 356 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.35□□□□□ -1.87
EFNB1P98172 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.35□□□□□ -1.87
EFNB1P98172 AL691449.1-201ENST00000426570 421 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 BNIP3P2-201ENST00000441221 577 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.35□□□□□ -1.87
EFNB1P98172 MRPS17P3-201ENST00000465453 385 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 RPL7P5-201ENST00000471472 736 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 RPS29P22-201ENST00000472363 168 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.35□□□□□ -1.87
EFNB1P98172 AL135752.1-201ENST00000479477 471 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.35□□□□□ -1.87
EFNB1P98172 FCF1P3-201ENST00000496394 590 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 AC108078.2-201ENST00000510750 236 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.35□□□□□ -1.87
EFNB1P98172 RNA5SP164-201ENST00000516533 110 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.35□□□□□ -1.87
EFNB1P98172 IGKV2-23-201ENST00000518729 323 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 AP001893.2-201ENST00000526949 202 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 AP003033.1-201ENST00000527244 415 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 AP003034.1-201ENST00000534621 422 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.35□□□□□ -1.87
EFNB1P98172 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.35□□□□□ -1.87
EFNB1P98172 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
EFNB1P98172 HMGB1P6-201ENST00000569046 646 ntBASIC3.35□□□□□ -1.87
EFNB1P98172 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
EFNB1P98172 DEFB131E-202ENST00000602581 683 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms