Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXC12P31275 ATG3P1-201ENST00000419507 911 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 PMCHL1-202ENST00000423102 261 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 RPL7P37-201ENST00000425095 738 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXC12P31275 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXC12P31275 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXC12P31275 MIR2053-201ENST00000459295 91 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 RPS23P7-201ENST00000466210 444 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 AC092451.1-201ENST00000480211 153 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 AC116337.1-201ENST00000509680 687 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 FTH1P9-201ENST00000513251 355 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 RNU6-143P-201ENST00000516942 93 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 RNU6-988P-201ENST00000519081 107 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 IGKV1-32-201ENST00000519290 311 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXC12P31275 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXC12P31275 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
HOXC12P31275 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXC12P31275 AL352979.3-201ENST00000553515 247 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 MIR4284-201ENST00000578924 81 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXC12P31275 AC002545.1-201ENST00000592511 181 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC12P31275 AC105254.2-201ENST00000603636 436 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 AL713922.2-201ENST00000619384 716 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 RMST_9.1-201ENST00000619945 193 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 AC015871.5-202ENST00000623252 701 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC12P31275 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC12P31275 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC12P31275 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC12P31275 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
HOXC12P31275 SDAD1P1-202ENST00000524156 2051 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC12P31275 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC12P31275 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.42□□□□□ -1.7
HOXC12P31275 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC12P31275 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC12P31275 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC12P31275 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXC12P31275 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXC12P31275 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC12P31275 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXC12P31275 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC12P31275 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HOXC12P31275 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC12P31275 KPNA2P1-201ENST00000458289 1591 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HOXC12P31275 AC138393.1-203ENST00000327086 343 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC12P31275 DEFB108F-201ENST00000344638 222 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 RNU6-266P-201ENST00000364225 107 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 RNU6-512P-201ENST00000364438 103 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 SNORA70.2-201ENST00000364506 135 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 Y_RNA.480-201ENST00000384364 102 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 SNORA70.10-201ENST00000384515 134 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
HOXC12P31275 AC073063.1-201ENST00000434352 607 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 TXNP1-201ENST00000441872 371 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 AL359672.1-201ENST00000442302 409 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC12P31275 HMGB3P30-201ENST00000457863 606 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 RPL31P60-201ENST00000478450 367 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 AC026801.1-201ENST00000497178 464 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC12P31275 AC105031.1-201ENST00000518550 476 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.41□□□□□ -1.7
HOXC12P31275 ATP5J2P6-201ENST00000565203 266 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 TVP23CP2-201ENST00000571473 623 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 AC073539.2-201ENST00000597113 165 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 AL591926.8-201ENST00000616876 211 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 AC098657.3-201ENST00000620434 263 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 MIR6758-201ENST00000620653 63 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXC12P31275 Z99571.1-201ENST00000636677 394 ntBASIC4.41□□□□□ -1.7
HOXC12P31275 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC12P31275 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC12P31275 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC12P31275 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC12P31275 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXC12P31275 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXC12P31275 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXC12P31275 AL049641.1-201ENST00000441055 1948 ntBASIC4.4□□□□□ -1.7
HOXC12P31275 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HOXC12P31275 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
HOXC12P31275 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HOXC12P31275 NOL8P1-201ENST00000508336 3529 ntBASIC4.4□□□□□ -1.7
HOXC12P31275 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HOXC12P31275 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HOXC12P31275 SDAD1P2-201ENST00000441308 2028 ntBASIC4.4□□□□□ -1.7
HOXC12P31275 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HOXC12P31275 Y_RNA.28-201ENST00000362554 111 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 Y_RNA.145-201ENST00000363527 102 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
HOXC12P31275 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXC12P31275 AC068538.1-201ENST00000376856 336 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 Y_RNA.534-201ENST00000384599 112 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 MIR578-201ENST00000384828 96 ntBASIC4.4□□□□□ -1.71
HOXC12P31275 MIR3074-201ENST00000384885 81 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms