Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 IGKV1-22-201ENST00000524313 326 ntBASIC6.71□□□□□ -1.34
CD44P16070 MIR4662A-201ENST00000637499 67 ntBASIC6.71□□□□□ -1.34
CD44P16070 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CD44P16070 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
CD44P16070 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CD44P16070 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CD44P16070 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CD44P16070 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
CD44P16070 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.71□□□□□ -1.34
CD44P16070 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CD44P16070 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CD44P16070 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CD44P16070 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CD44P16070 THAP12P5-201ENST00000405864 2275 ntBASIC6.7□□□□□ -1.34
CD44P16070 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CD44P16070 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CD44P16070 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CD44P16070 Y_RNA.179-201ENST00000363844 90 ntBASIC6.7□□□□□ -1.34
CD44P16070 RNU6-978P-201ENST00000364371 103 ntBASIC6.7□□□□□ -1.34
CD44P16070 RNU105B-201ENST00000364478 208 ntBASIC6.7□□□□□ -1.34
CD44P16070 RNU1-74P-201ENST00000384108 171 ntBASIC6.7□□□□□ -1.34
CD44P16070 RNU6-242P-201ENST00000384359 107 ntBASIC6.7□□□□□ -1.34
CD44P16070 RNU6-729P-201ENST00000384399 107 ntBASIC6.7□□□□□ -1.34
CD44P16070 Y_RNA.528-201ENST00000384575 108 ntBASIC6.7□□□□□ -1.34
CD44P16070 MIR570-201ENST00000384917 97 ntBASIC6.7□□□□□ -1.34
CD44P16070 AL512633.1-201ENST00000399931 655 ntBASIC6.7□□□□□ -1.34
CD44P16070 GCNT1P4-201ENST00000404096 329 ntBASIC6.7□□□□□ -1.34
CD44P16070 MIR1263-201ENST00000408324 86 ntBASIC6.7□□□□□ -1.34
CD44P16070 RNU2-43P-201ENST00000410306 190 ntBASIC6.7□□□□□ -1.34
CD44P16070 RNU6-383P-201ENST00000410864 94 ntBASIC6.7□□□□□ -1.34
CD44P16070 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.7□□□□□ -1.34
CD44P16070 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.7□□□□□ -1.34
CD44P16070 RN7SL66P-201ENST00000582099 264 ntBASIC6.7□□□□□ -1.34
CD44P16070 SNRPGP20-201ENST00000604477 205 ntBASIC6.7□□□□□ -1.34
CD44P16070 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.7□□□□□ -1.34
CD44P16070 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
CD44P16070 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CD44P16070 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.7□□□□□ -1.34
CD44P16070 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CD44P16070 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
CD44P16070 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CD44P16070 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.7□□□□□ -1.34
CD44P16070 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.7□□□□□ -1.34
CD44P16070 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6.7□□□□□ -1.34
CD44P16070 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CD44P16070 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
CD44P16070 AC010168.2-201ENST00000562691 5428 ntBASIC6.69□□□□□ -1.34
CD44P16070 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.69□□□□□ -1.34
CD44P16070 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.69□□□□□ -1.34
CD44P16070 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CD44P16070 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CD44P16070 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
CD44P16070 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CD44P16070 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
CD44P16070 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CD44P16070 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CD44P16070 MIR92A2-201ENST00000385299 75 ntBASIC6.69□□□□□ -1.34
CD44P16070 RNU6-821P-201ENST00000390995 107 ntBASIC6.69□□□□□ -1.34
CD44P16070 AC064862.5-201ENST00000440618 334 ntBASIC6.69□□□□□ -1.34
CD44P16070 RPL12P49-201ENST00000441100 121 ntBASIC6.69□□□□□ -1.34
CD44P16070 AC099670.1-201ENST00000455141 783 ntBASIC6.69□□□□□ -1.34
CD44P16070 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC6.69□□□□□ -1.34
CD44P16070 ACA64.4-201ENST00000459070 127 ntBASIC6.69□□□□□ -1.34
CD44P16070 RNU7-141P-201ENST00000459304 62 ntBASIC6.69□□□□□ -1.34
CD44P16070 RN7SL189P-201ENST00000468631 289 ntBASIC6.69□□□□□ -1.34
CD44P16070 AC100832.1-201ENST00000471945 383 ntBASIC6.69□□□□□ -1.34
CD44P16070 TRBV5-2-201ENST00000489095 273 ntBASIC6.69□□□□□ -1.34
CD44P16070 AC090958.1-201ENST00000511122 351 ntBASIC6.69□□□□□ -1.34
CD44P16070 RNU6-1018P-201ENST00000516577 106 ntBASIC6.69□□□□□ -1.34
CD44P16070 SNORA31.22-201ENST00000517204 135 ntBASIC6.69□□□□□ -1.34
CD44P16070 AP000620.1-201ENST00000527147 504 ntBASIC6.69□□□□□ -1.34
CD44P16070 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CD44P16070 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.69□□□□□ -1.34
CD44P16070 AL161798.1-201ENST00000604630 131 ntBASIC6.69□□□□□ -1.34
CD44P16070 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.69□□□□□ -1.34
CD44P16070 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.69□□□□□ -1.34
CD44P16070 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC6.69□□□□□ -1.34
CD44P16070 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CD44P16070 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CD44P16070 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
CD44P16070 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CD44P16070 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CD44P16070 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CD44P16070 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CD44P16070 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.69□□□□□ -1.34
CD44P16070 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CD44P16070 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.68□□□□□ -1.34
CD44P16070 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
CD44P16070 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC6.68□□□□□ -1.34
CD44P16070 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.68□□□□□ -1.34
CD44P16070 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC6.68□□□□□ -1.34
CD44P16070 Y_RNA.107-201ENST00000363190 121 ntBASIC6.68□□□□□ -1.34
CD44P16070 RNU6-1167P-201ENST00000363227 94 ntBASIC6.68□□□□□ -1.34
CD44P16070 SNORD1C-201ENST00000363315 78 ntBASIC6.68□□□□□ -1.34
CD44P16070 RNU6-776P-201ENST00000364403 104 ntBASIC6.68□□□□□ -1.34
CD44P16070 RNU6-1022P-201ENST00000365049 104 ntBASIC6.68□□□□□ -1.34
CD44P16070 RNU6-497P-201ENST00000365316 104 ntBASIC6.68□□□□□ -1.34
CD44P16070 AC007560.1-201ENST00000426912 237 ntBASIC6.68□□□□□ -1.34
CD44P16070 RPL12P16-201ENST00000431098 498 ntBASIC6.68□□□□□ -1.34
CD44P16070 CYCSP6-201ENST00000434498 302 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms