Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 MTND2P13-201ENST00000577438 1039 ntBASIC1.82□□□□□ -2.12
POLR1AO95602 AC073592.7-201ENST00000623659 507 ntBASIC1.82□□□□□ -2.12
POLR1AO95602 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
POLR1AO95602 ICE2P2-201ENST00000483823 2787 ntBASIC1.81□□□□□ -2.12
POLR1AO95602 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
POLR1AO95602 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
POLR1AO95602 CCNB2P1-201ENST00000399411 1150 ntBASIC1.81□□□□□ -2.12
POLR1AO95602 RPS20P15-201ENST00000412792 311 ntBASIC1.81□□□□□ -2.12
POLR1AO95602 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.81□□□□□ -2.12
POLR1AO95602 MTND1P18-201ENST00000448191 573 ntBASIC1.81□□□□□ -2.12
POLR1AO95602 AC010683.1-201ENST00000473673 378 ntBASIC1.81□□□□□ -2.12
POLR1AO95602 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.81□□□□□ -2.12
POLR1AO95602 AC004241.3-201ENST00000611728 517 ntBASIC1.81□□□□□ -2.12
POLR1AO95602 AL589935.2-201ENST00000616471 1231 ntBASIC1.81□□□□□ -2.12
POLR1AO95602 AC130650.2-201ENST00000618736 2403 ntBASIC1.81□□□□□ -2.12
POLR1AO95602 HMGN1P14-201ENST00000412459 517 ntBASIC1.8□□□□□ -2.12
POLR1AO95602 RPL31P2-201ENST00000413849 377 ntBASIC1.8□□□□□ -2.12
POLR1AO95602 Z75741.2-201ENST00000417272 1167 ntBASIC1.8□□□□□ -2.12
POLR1AO95602 UBBP3-201ENST00000445497 241 ntBASIC1.8□□□□□ -2.12
POLR1AO95602 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.8□□□□□ -2.12
POLR1AO95602 HMGN2P13-201ENST00000476476 274 ntBASIC1.8□□□□□ -2.12
POLR1AO95602 AC113155.1-201ENST00000511141 769 ntBASIC1.8□□□□□ -2.12
POLR1AO95602 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.8□□□□□ -2.12
POLR1AO95602 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.8□□□□□ -2.12
POLR1AO95602 RN7SL793P-201ENST00000583259 296 ntBASIC1.8□□□□□ -2.12
POLR1AO95602 DUXAP4-201ENST00000603046 613 ntBASIC1.8□□□□□ -2.12
POLR1AO95602 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
POLR1AO95602 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.8□□□□□ -2.12
POLR1AO95602 AL355497.1-201ENST00000406262 551 ntBASIC1.8□□□□□ -2.12
POLR1AO95602 AC092447.6-201ENST00000414578 210 ntBASIC1.8□□□□□ -2.12
POLR1AO95602 AL627224.1-201ENST00000448334 444 ntBASIC1.8□□□□□ -2.12
POLR1AO95602 RPS27P21-201ENST00000486977 252 ntBASIC1.8□□□□□ -2.12
POLR1AO95602 AP003033.1-201ENST00000527244 415 ntBASIC1.8□□□□□ -2.12
POLR1AO95602 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.8□□□□□ -2.12
POLR1AO95602 AL360085.1-201ENST00000604713 532 ntBASIC1.8□□□□□ -2.12
POLR1AO95602 AL136164.4-201ENST00000625013 2135 ntBASIC1.8□□□□□ -2.12
POLR1AO95602 DDX43P2-201ENST00000604753 1354 ntBASIC1.8□□□□□ -2.12
POLR1AO95602 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.79□□□□□ -2.12
POLR1AO95602 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.79□□□□□ -2.12
POLR1AO95602 MIR5000-201ENST00000577717 103 ntBASIC1.79□□□□□ -2.12
POLR1AO95602 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.79□□□□□ -2.12
POLR1AO95602 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.79□□□□□ -2.12
POLR1AO95602 SNORA18.2-201ENST00000383865 132 ntBASIC1.78□□□□□ -2.12
POLR1AO95602 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.78□□□□□ -2.12
POLR1AO95602 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.78□□□□□ -2.12
POLR1AO95602 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.78□□□□□ -2.12
POLR1AO95602 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.78□□□□□ -2.12
POLR1AO95602 CBX3P2-202ENST00000583365 535 ntBASIC1.78□□□□□ -2.12
POLR1AO95602 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
POLR1AO95602 Y_RNA.30-201ENST00000362572 97 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 AL356057.2-201ENST00000403318 432 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 TRIM60P13-201ENST00000432350 1283 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 IPO7P1-201ENST00000442031 636 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 RNU2-44P-201ENST00000516795 194 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 SNORD59.2-201ENST00000516873 68 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 AC009127.3-201ENST00000570531 403 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 HMGB1P49-201ENST00000418882 569 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.77□□□□□ -2.13
POLR1AO95602 RPS3AP44-201ENST00000425466 790 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 AL121601.2-201ENST00000438019 707 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 RPL17P49-201ENST00000443728 411 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 SSXP4-201ENST00000451349 245 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 AC009901.1-201ENST00000506703 541 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.77□□□□□ -2.13
POLR1AO95602 RNU6-347P-201ENST00000516658 105 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.77□□□□□ -2.13
POLR1AO95602 AF279873.1-201ENST00000523393 313 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 AL121821.2-201ENST00000556081 394 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 AL121839.1-201ENST00000556233 1185 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 SUB1P4-201ENST00000566062 339 ntBASIC1.77□□□□□ -2.13
POLR1AO95602 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
POLR1AO95602 RNU4-91P-201ENST00000364778 135 ntBASIC1.76□□□□□ -2.13
POLR1AO95602 MIR513A1-201ENST00000385138 129 ntBASIC1.76□□□□□ -2.13
POLR1AO95602 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.76□□□□□ -2.13
POLR1AO95602 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.76□□□□□ -2.13
POLR1AO95602 OR6K5P-201ENST00000447050 945 ntBASIC1.76□□□□□ -2.13
POLR1AO95602 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
POLR1AO95602 AC135776.4-201ENST00000624300 1904 ntBASIC1.75□□□□□ -2.13
POLR1AO95602 RNU6-203P-201ENST00000384038 104 ntBASIC1.75□□□□□ -2.13
POLR1AO95602 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.75□□□□□ -2.13
POLR1AO95602 AC023050.1-201ENST00000498198 304 ntBASIC1.75□□□□□ -2.13
POLR1AO95602 RNA5SP436-201ENST00000516020 115 ntBASIC1.75□□□□□ -2.13
POLR1AO95602 AC068714.1-201ENST00000559623 800 ntBASIC1.75□□□□□ -2.13
POLR1AO95602 RNA5SP108-201ENST00000605921 117 ntBASIC1.75□□□□□ -2.13
POLR1AO95602 ZNF734P-201ENST00000419494 1534 ntBASIC1.75□□□□□ -2.13
POLR1AO95602 MIR92A2-201ENST00000385299 75 ntBASIC1.74□□□□□ -2.13
POLR1AO95602 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
POLR1AO95602 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.74□□□□□ -2.13
POLR1AO95602 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.74□□□□□ -2.13
POLR1AO95602 HMGN2P21-201ENST00000447764 270 ntBASIC1.74□□□□□ -2.13
POLR1AO95602 TPRKBP1-201ENST00000456243 481 ntBASIC1.74□□□□□ -2.13
POLR1AO95602 AC108059.3-201ENST00000456388 214 ntBASIC1.74□□□□□ -2.13
POLR1AO95602 AC023790.1-201ENST00000482174 347 ntBASIC1.74□□□□□ -2.13
POLR1AO95602 RNU6-711P-201ENST00000517255 106 ntBASIC1.74□□□□□ -2.13
POLR1AO95602 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.74□□□□□ -2.13
POLR1AO95602 CASP1P1-201ENST00000526345 212 ntBASIC1.74□□□□□ -2.13
POLR1AO95602 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.74□□□□□ -2.13
POLR1AO95602 GLUD1P4-201ENST00000590914 418 ntBASIC1.74□□□□□ -2.13
POLR1AO95602 RNY1P4-201ENST00000384595 115 ntBASIC1.74□□□□□ -2.13
POLR1AO95602 AL035407.2-201ENST00000454090 378 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms