Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 RNA5SP441-201ENST00000516809 88 ntBASIC8.91□□□□□ -0.98
MSH5O43196 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC8.91□□□□□ -0.98
MSH5O43196 HSPE1P19-201ENST00000603327 295 ntBASIC8.91□□□□□ -0.98
MSH5O43196 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC8.91□□□□□ -0.98
MSH5O43196 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC8.91□□□□□ -0.98
MSH5O43196 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC8.91□□□□□ -0.98
MSH5O43196 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
MSH5O43196 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
MSH5O43196 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
MSH5O43196 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
MSH5O43196 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
MSH5O43196 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.9□□□□□ -0.98
MSH5O43196 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
MSH5O43196 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
MSH5O43196 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
MSH5O43196 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
MSH5O43196 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
MSH5O43196 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
MSH5O43196 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.9□□□□□ -0.98
MSH5O43196 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC8.9□□□□□ -0.98
MSH5O43196 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
MSH5O43196 Y_RNA.386-201ENST00000383913 105 ntBASIC8.9□□□□□ -0.98
MSH5O43196 HMGB1P37-201ENST00000439613 609 ntBASIC8.9□□□□□ -0.98
MSH5O43196 POU5F1P5-201ENST00000445059 658 ntBASIC8.9□□□□□ -0.98
MSH5O43196 CBX1-205ENST00000495350 550 ntTSL 2 BASIC8.9□□□□□ -0.98
MSH5O43196 RNU6-1149P-201ENST00000516810 97 ntBASIC8.9□□□□□ -0.98
MSH5O43196 Y_RNA.705-201ENST00000516862 110 ntBASIC8.9□□□□□ -0.98
MSH5O43196 Y_RNA.710-201ENST00000516975 110 ntBASIC8.9□□□□□ -0.98
MSH5O43196 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC8.9□□□□□ -0.98
MSH5O43196 MIR4502-201ENST00000580432 81 ntBASIC8.9□□□□□ -0.98
MSH5O43196 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC8.9□□□□□ -0.98
MSH5O43196 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC8.9□□□□□ -0.98
MSH5O43196 uc_338.26-201ENST00000612659 160 ntBASIC8.9□□□□□ -0.98
MSH5O43196 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC8.9□□□□□ -0.98
MSH5O43196 AC027309.3-201ENST00000623419 351 ntBASIC8.9□□□□□ -0.98
MSH5O43196 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC8.9□□□□□ -0.98
MSH5O43196 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
MSH5O43196 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
MSH5O43196 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC8.89□□□□□ -0.99
MSH5O43196 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
MSH5O43196 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC8.89□□□□□ -0.99
MSH5O43196 AC125257.1-201ENST00000560400 2930 ntBASIC8.89□□□□□ -0.99
MSH5O43196 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
MSH5O43196 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
MSH5O43196 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
MSH5O43196 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
MSH5O43196 RNU6-832P-201ENST00000363319 107 ntBASIC8.89□□□□□ -0.99
MSH5O43196 SNORA26-201ENST00000391286 122 ntBASIC8.89□□□□□ -0.99
MSH5O43196 ATP6V1G1P4-201ENST00000438388 335 ntBASIC8.89□□□□□ -0.99
MSH5O43196 NDUFS5P3-201ENST00000450668 321 ntBASIC8.89□□□□□ -0.99
MSH5O43196 AC010099.1-201ENST00000455434 375 ntBASIC8.89□□□□□ -0.99
MSH5O43196 RN7SL413P-201ENST00000482700 297 ntBASIC8.89□□□□□ -0.99
MSH5O43196 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.89□□□□□ -0.99
MSH5O43196 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC8.89□□□□□ -0.99
MSH5O43196 AC010325.3-201ENST00000641084 394 ntBASIC8.89□□□□□ -0.99
MSH5O43196 AC091304.10-201ENST00000641554 121 ntBASIC8.89□□□□□ -0.99
MSH5O43196 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
MSH5O43196 MAPK10-287ENST00000641217 3037 ntBASIC8.89□□□□□ -0.99
MSH5O43196 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
MSH5O43196 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
MSH5O43196 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
MSH5O43196 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC8.89□□□□□ -0.99
MSH5O43196 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
MSH5O43196 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
MSH5O43196 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
MSH5O43196 AC025470.1-201ENST00000510053 2032 ntBASIC8.88□□□□□ -0.99
MSH5O43196 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
MSH5O43196 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
MSH5O43196 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC8.88□□□□□ -0.99
MSH5O43196 AC092070.2-203ENST00000598377 3644 ntBASIC8.88□□□□□ -0.99
MSH5O43196 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
MSH5O43196 RNU6-296P-201ENST00000384608 107 ntBASIC8.88□□□□□ -0.99
MSH5O43196 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC8.88□□□□□ -0.99
MSH5O43196 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC8.88□□□□□ -0.99
MSH5O43196 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC8.88□□□□□ -0.99
MSH5O43196 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC8.88□□□□□ -0.99
MSH5O43196 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC8.88□□□□□ -0.99
MSH5O43196 AC120036.3-201ENST00000517826 292 ntBASIC8.88□□□□□ -0.99
MSH5O43196 IGHVIII-67-2-201ENST00000519849 88 ntBASIC8.88□□□□□ -0.99
MSH5O43196 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC8.88□□□□□ -0.99
MSH5O43196 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.88□□□□□ -0.99
MSH5O43196 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC8.88□□□□□ -0.99
MSH5O43196 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC8.88□□□□□ -0.99
MSH5O43196 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC8.88□□□□□ -0.99
MSH5O43196 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
MSH5O43196 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
MSH5O43196 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
MSH5O43196 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.88□□□□□ -0.99
MSH5O43196 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC8.88□□□□□ -0.99
MSH5O43196 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.88□□□□□ -0.99
MSH5O43196 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
MSH5O43196 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
MSH5O43196 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
MSH5O43196 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC8.87□□□□□ -0.99
MSH5O43196 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
MSH5O43196 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
MSH5O43196 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC8.87□□□□□ -0.99
MSH5O43196 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
MSH5O43196 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC8.87□□□□□ -0.99
MSH5O43196 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms