Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 MIR4672-201ENST00000583126 81 ntBASIC3.17□□□□□ -1.9
PCDHGA1Q9Y5H4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHGA1Q9Y5H4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHGA1Q9Y5H4 AC067852.3-201ENST00000589177 561 ntBASIC3.17□□□□□ -1.9
PCDHGA1Q9Y5H4 AC006023.1-201ENST00000603944 259 ntBASIC3.17□□□□□ -1.9
PCDHGA1Q9Y5H4 OR2AS2P-201ENST00000606902 342 ntBASIC3.17□□□□□ -1.9
PCDHGA1Q9Y5H4 AL360219.1-201ENST00000610230 366 ntBASIC3.17□□□□□ -1.9
PCDHGA1Q9Y5H4 AC004852.3-201ENST00000614131 326 ntBASIC3.17□□□□□ -1.9
PCDHGA1Q9Y5H4 AC079416.3-201ENST00000624479 549 ntBASIC3.17□□□□□ -1.9
PCDHGA1Q9Y5H4 PCMTD1P7-201ENST00000634506 357 ntBASIC3.17□□□□□ -1.9
PCDHGA1Q9Y5H4 AC099063.3-201ENST00000642066 185 ntBASIC3.17□□□□□ -1.9
PCDHGA1Q9Y5H4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.17□□□□□ -1.9
PCDHGA1Q9Y5H4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHGA1Q9Y5H4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AC068647.1-201ENST00000489539 2265 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 RNA5SP197-201ENST00000363357 119 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 RNU5E-8P-201ENST00000363502 116 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 SNORA5B-201ENST00000363786 132 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 RNU6-853P-201ENST00000364306 107 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 RNU6-114P-201ENST00000384704 105 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 Z99755.1-201ENST00000414048 380 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AC107081.1-201ENST00000414975 361 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 RPL23AP39-201ENST00000415533 405 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AC072039.1-201ENST00000477611 581 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 RN7SL429P-201ENST00000479090 223 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 RN7SL489P-201ENST00000486185 223 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 RPS3AP50-201ENST00000487064 803 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 RN7SL327P-201ENST00000488659 223 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AC092185.1-201ENST00000491371 97 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 SNORA70.19-201ENST00000516717 90 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 RNU6-840P-201ENST00000517275 65 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AP006245.1-201ENST00000522549 120 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 ATP5F1P5-201ENST00000526403 760 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 DUXAP5-201ENST00000529668 529 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AC005476.1-201ENST00000554427 397 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AL355836.1-201ENST00000555951 870 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 OR4H12P-201ENST00000556269 907 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AC015917.1-201ENST00000579654 510 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 NUTF2P8-201ENST00000604593 363 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AL161629.2-201ENST00000615347 275 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 RN7SL853P-201ENST00000617250 223 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AC018692.3-201ENST00000623929 123 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AC019226.1-201ENST00000625666 515 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AC099654.7-201ENST00000635788 2127 ntBASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PCDHGA1Q9Y5H4 AP003122.5-201ENST00000527668 3766 ntBASIC3.15□□□□□ -1.9
PCDHGA1Q9Y5H4 AC073073.2-201ENST00000609827 2578 ntBASIC3.15□□□□□ -1.9
PCDHGA1Q9Y5H4 AC009902.3-201ENST00000606235 2172 ntBASIC3.15□□□□□ -1.9
PCDHGA1Q9Y5H4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PCDHGA1Q9Y5H4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 RNU6-500P-201ENST00000362349 107 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 RNU6-769P-201ENST00000384407 104 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 HMGB1P11-201ENST00000413899 637 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 ATG3P1-201ENST00000419507 911 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 MTND4P20-201ENST00000424125 869 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 RPL23AP82-202ENST00000427528 469 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 RPL7P34-201ENST00000433316 712 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 MTCYBP39-201ENST00000437562 491 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 ELOCP23-201ENST00000452014 332 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 RPS27P29-201ENST00000463110 252 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 AC004924.1-201ENST00000480160 781 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 MRPS33P3-201ENST00000513456 322 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 NIFKP6-201ENST00000598115 845 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 BNIP3P23-201ENST00000599655 511 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 DUXAP4-201ENST00000603046 613 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 BCRP9-201ENST00000605312 388 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 AC093838.1-201ENST00000613014 469 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 AC090132.2-201ENST00000615881 347 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 AC091304.6-201ENST00000619761 202 ntBASIC3.15□□□□□ -1.91
PCDHGA1Q9Y5H4 AC090617.7-201ENST00000623952 126 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms