Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC021749.1-201ENST00000604322 607 ntBASIC1.02□□□□□ -2.25
SMCO4Q9NRQ5 AC007998.5-201ENST00000622938 237 ntBASIC1.02□□□□□ -2.25
SMCO4Q9NRQ5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 SNORA22-201ENST00000383907 134 ntBASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 SNORA22C-201ENST00000384614 134 ntBASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 RNU6-253P-201ENST00000384730 105 ntBASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 CYCSP32-201ENST00000440548 321 ntBASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 AL831737.1-201ENST00000441288 271 ntBASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 SSXP1-201ENST00000453640 473 ntBASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 AC103783.1-201ENST00000520506 373 ntBASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 EIF4BP1-201ENST00000554881 351 ntBASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 SNORD53B-201ENST00000577887 78 ntBASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.01□□□□□ -2.25
SMCO4Q9NRQ5 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SMCO4Q9NRQ5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1□□□□□ -2.25
SMCO4Q9NRQ5 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1□□□□□ -2.25
SMCO4Q9NRQ5 MRPL35P3-201ENST00000421557 364 ntBASIC1□□□□□ -2.25
SMCO4Q9NRQ5 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1□□□□□ -2.25
SMCO4Q9NRQ5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1□□□□□ -2.25
SMCO4Q9NRQ5 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1□□□□□ -2.25
SMCO4Q9NRQ5 MTCYBP3-201ENST00000445588 1137 ntBASIC1□□□□□ -2.25
SMCO4Q9NRQ5 RPS29P28-201ENST00000446439 141 ntBASIC1□□□□□ -2.25
SMCO4Q9NRQ5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1□□□□□ -2.25
SMCO4Q9NRQ5 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1□□□□□ -2.25
SMCO4Q9NRQ5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1□□□□□ -2.25
SMCO4Q9NRQ5 SETP6-201ENST00000479329 568 ntBASIC1□□□□□ -2.25
SMCO4Q9NRQ5 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1□□□□□ -2.25
SMCO4Q9NRQ5 RNA5SP445-201ENST00000515889 115 ntBASIC1□□□□□ -2.25
SMCO4Q9NRQ5 RNU6-250P-201ENST00000516958 103 ntBASIC1□□□□□ -2.25
SMCO4Q9NRQ5 SNORA31.24-201ENST00000517232 57 ntBASIC1□□□□□ -2.25
SMCO4Q9NRQ5 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1□□□□□ -2.25
SMCO4Q9NRQ5 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1□□□□□ -2.25
SMCO4Q9NRQ5 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1□□□□□ -2.25
SMCO4Q9NRQ5 AP002791.1-201ENST00000623291 381 ntBASIC1□□□□□ -2.25
SMCO4Q9NRQ5 AC087821.2-201ENST00000637086 450 ntBASIC1□□□□□ -2.25
SMCO4Q9NRQ5 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 RNU6-1293P-201ENST00000384077 107 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 SNORD26-201ENST00000384147 75 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 SNORA67.6-201ENST00000391093 99 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 MIR1323-201ENST00000408090 73 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 RNU6-1140P-201ENST00000410517 106 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 TOMM22P2-201ENST00000430735 237 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 AL139415.2-201ENST00000431968 163 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 FGF7P5-201ENST00000441829 291 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 SNORD97-201ENST00000459187 142 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 RPL30P9-201ENST00000465586 330 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 AP000926.3-201ENST00000497201 299 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 AC021087.2-201ENST00000504656 1203 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 AC093752.1-206ENST00000511823 336 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 SNRPGP16-201ENST00000533275 226 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 MIR3198-2-201ENST00000577868 80 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 AC016925.2-201ENST00000605108 242 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 AL160281.1-201ENST00000605307 311 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 AC103710.2-201ENST00000609912 942 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 MIR8081-201ENST00000611533 95 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 RNU6-156P-201ENST00000621869 107 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 AP001002.2-201ENST00000625137 386 ntBASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC0.99□□□□□ -2.25
SMCO4Q9NRQ5 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 AP000560.1-201ENST00000624150 1937 ntBASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 SNORA62.1-201ENST00000364287 154 ntBASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 AL356967.1-201ENST00000406305 431 ntBASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 RN7SKP158-201ENST00000410453 326 ntBASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 RN7SKP223-201ENST00000410582 62 ntBASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 Z98742.3-201ENST00000418637 326 ntBASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 HMGB1P48-201ENST00000446155 598 ntBASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 FAM206BP-201ENST00000510179 541 ntBASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 AC016065.2-201ENST00000514530 444 ntBASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 PRELID3BP4-201ENST00000515476 571 ntBASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 AP002812.4-201ENST00000532139 286 ntBASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 AL390838.2-201ENST00000602394 274 ntBASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 BX649567.1-201ENST00000642071 1134 ntBASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SMCO4Q9NRQ5 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms