Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 Z69720.2-201ENST00000624755 279 ntBASIC5.33□□□□□ -1.56
ZFYVE28Q9HCC9 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ZFYVE28Q9HCC9 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ZFYVE28Q9HCC9 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.33□□□□□ -1.56
ZFYVE28Q9HCC9 AC104260.2-201ENST00000623551 3497 ntBASIC5.33□□□□□ -1.56
ZFYVE28Q9HCC9 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ZFYVE28Q9HCC9 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
ZFYVE28Q9HCC9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 RNU6-263P-201ENST00000363811 107 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 RNU6-190P-201ENST00000384154 102 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 MIR135A2-201ENST00000384854 100 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 MIR659-201ENST00000384963 97 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 SNORA75.6-201ENST00000391318 127 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 RN7SKP202-201ENST00000410439 330 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 RPS20P1-201ENST00000434853 354 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 AC004866.2-201ENST00000438285 481 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 RPL23AP93-201ENST00000440847 484 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 AL121871.1-201ENST00000443413 436 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 RPL12P25-201ENST00000455592 494 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 SCARNA10-201ENST00000459255 330 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 MTATP8P1-201ENST00000467115 207 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 AC073073.1-201ENST00000493920 463 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 AC026801.1-201ENST00000497178 464 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 AC026782.1-201ENST00000512952 449 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 AC104136.1-201ENST00000512969 394 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 RNU6-677P-201ENST00000516914 101 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 AC105031.1-201ENST00000518550 476 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 MIR3158-1-201ENST00000583596 81 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 AC018462.2-201ENST00000605375 395 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.32□□□□□ -1.56
ZFYVE28Q9HCC9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 SPRR2C-201ENST00000290702 219 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 Y_RNA.47-201ENST00000362697 108 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 Y_RNA.557-201ENST00000384680 107 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 MIR670-201ENST00000390142 98 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 AL139039.1-201ENST00000401900 692 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 Y_RNA.618-201ENST00000410949 107 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 AL132765.1-201ENST00000434165 553 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 HIGD1AP11-201ENST00000438361 280 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 RNU6-513P-201ENST00000516104 104 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 RNU6-1095P-201ENST00000516148 108 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 Y_RNA.670-201ENST00000516255 105 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 AC087854.1-201ENST00000519706 414 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 AC026371.1-201ENST00000551867 419 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 AC067852.4-201ENST00000590314 478 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 AC004696.1-201ENST00000614345 607 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 MIR4275-201ENST00000636486 87 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 AC090971.4-201ENST00000560291 1800 ntBASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ZFYVE28Q9HCC9 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 AL136164.3-201ENST00000624429 3978 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 RNU6-490P-201ENST00000362985 107 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 RNU4-44P-201ENST00000363050 141 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 Y_RNA.176-201ENST00000363815 109 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 Y_RNA.193-201ENST00000363979 102 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 SNORA62.3-201ENST00000365110 153 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 Y_RNA.404-201ENST00000383978 102 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 RNY1P14-201ENST00000384426 108 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 Y_RNA.527-201ENST00000384573 102 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 PPIAP31-201ENST00000405422 495 ntBASIC5.3□□□□□ -1.56
ZFYVE28Q9HCC9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms