Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RPRD1AQ96P16 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.71□□□□□ -1.97
RPRD1AQ96P16 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
RPRD1AQ96P16 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RPRD1AQ96P16 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
RPRD1AQ96P16 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
RPRD1AQ96P16 RNU5E-10P-201ENST00000363506 118 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
RPRD1AQ96P16 RNU1-138P-201ENST00000384093 164 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RPRD1AQ96P16 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RPRD1AQ96P16 AL590004.2-201ENST00000404787 371 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.71□□□□□ -1.98
RPRD1AQ96P16 USP9YP11-201ENST00000427537 717 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 AL356867.1-201ENST00000429623 299 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 AL512844.2-201ENST00000433990 593 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 MTCO1P53-201ENST00000441633 699 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 MRPL50P4-201ENST00000446432 475 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 MTCO2P25-201ENST00000447065 681 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.71□□□□□ -1.98
RPRD1AQ96P16 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.71□□□□□ -1.98
RPRD1AQ96P16 RPL30P9-201ENST00000465586 330 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.71□□□□□ -1.98
RPRD1AQ96P16 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.71□□□□□ -1.98
RPRD1AQ96P16 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.71□□□□□ -1.98
RPRD1AQ96P16 AC112206.4-201ENST00000515142 405 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 DEFB131D-201ENST00000526803 184 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
RPRD1AQ96P16 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.71□□□□□ -1.98
RPRD1AQ96P16 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.71□□□□□ -1.98
RPRD1AQ96P16 CYCSP2-201ENST00000558168 301 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 AC090888.1-201ENST00000561335 1141 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 AL512347.1-201ENST00000566420 503 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 BNIP3P27-201ENST00000599991 412 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 AL049779.4-201ENST00000604500 156 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 AL161629.2-201ENST00000615347 275 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 MIR6852-201ENST00000621699 66 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 AC099654.8-201ENST00000637757 681 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 AC135776.4-201ENST00000624300 1904 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 SDAD1P2-201ENST00000441308 2028 ntBASIC2.71□□□□□ -1.98
RPRD1AQ96P16 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.71□□□□□ -1.98
RPRD1AQ96P16 ASNSP3-201ENST00000451989 1306 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 FTLP6-201ENST00000355274 422 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 SNORD62.1-201ENST00000362541 86 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 RNU6-1035P-201ENST00000384477 107 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 AL139039.1-201ENST00000401900 692 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 AL355143.1-201ENST00000407101 841 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 RPLP0P7-201ENST00000416050 667 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 SPA17P1-201ENST00000416656 452 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 MTND5P14-201ENST00000441481 1267 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 AL358794.1-201ENST00000445689 381 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 AC027673.1-201ENST00000456245 405 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 RPL9P33-201ENST00000484311 566 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 LARP1BP2-201ENST00000486594 519 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 RNU6-150P-201ENST00000516237 95 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 AC100870.1-201ENST00000522035 505 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 AC124947.2-202ENST00000552735 133 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 MIR3670-2-201ENST00000582974 65 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 MIR3670-1-201ENST00000584160 65 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 MIR3670-3-201ENST00000584855 65 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 BNIP3P26-201ENST00000600827 554 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 AL161734.1-201ENST00000609720 557 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 MIR3670-4-201ENST00000612260 65 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 AL049777.1-201ENST00000622740 518 ntBASIC2.7□□□□□ -1.98
RPRD1AQ96P16 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
RPRD1AQ96P16 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 RNA5SP393-201ENST00000363423 117 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 RNU6-560P-201ENST00000364007 108 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 Z85995.1-201ENST00000415547 335 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AL365496.1-201ENST00000426885 215 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AL590383.1-201ENST00000428602 75 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AC092427.1-202ENST00000430569 476 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AC129850.1-201ENST00000436203 508 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 MTND1P31-201ENST00000449206 961 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 ZNF886P-201ENST00000450781 723 ntBASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.69□□□□□ -1.98
RPRD1AQ96P16 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms