Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RNU1-82P-201ENST00000390851 165 ntBASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 AL359672.1-201ENST00000442302 409 ntBASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 RNU6-953P-201ENST00000459154 107 ntBASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 AC091868.1-201ENST00000508746 304 ntBASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 RN7SKP258-201ENST00000517151 304 ntBASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 AC023442.1-201ENST00000531247 422 ntBASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 AC022882.1-201ENST00000532142 501 ntBASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 BNIP3P1-201ENST00000547295 580 ntBASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 AC093249.4-201ENST00000564755 259 ntBASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 MIR4458-201ENST00000578872 75 ntBASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 AC073539.2-201ENST00000597113 165 ntBASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 AC124312.5-201ENST00000604451 268 ntBASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 MIR6853-201ENST00000619642 74 ntBASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 AL162373.1-201ENST00000620433 407 ntBASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.49□□□□□ -1.69
PTCHD1Q96NR3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 SNORD62.1-201ENST00000362541 86 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 Y_RNA.149-201ENST00000363558 117 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 RNU6-214P-201ENST00000384130 107 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 RNU6-45P-201ENST00000384471 107 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 Y_RNA.557-201ENST00000384680 107 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 RNU6-837P-201ENST00000391056 108 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 RNU6-817P-201ENST00000391083 104 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 MIR298-201ENST00000401212 88 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AL590704.1-201ENST00000402856 794 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 MIR1271-201ENST00000408537 86 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 RNU4-6P-201ENST00000410804 122 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 RPL7AP73-201ENST00000413490 353 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AC080125.1-201ENST00000414888 684 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 BX510359.2-201ENST00000417920 305 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AL591212.2-201ENST00000433923 257 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AC005154.2-201ENST00000438110 379 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AC008264.1-201ENST00000447612 367 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AC103987.1-201ENST00000473394 348 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AC022795.1-201ENST00000473808 480 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 NIP7P2-201ENST00000485801 544 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AC096745.1-201ENST00000509945 370 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 RNU6-470P-201ENST00000515954 104 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 RNU6-840P-201ENST00000517275 65 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AC025423.5-201ENST00000550230 219 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AC012119.1-201ENST00000603184 222 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AL161616.1-201ENST00000611867 286 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AL713922.2-201ENST00000619384 716 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AP001273.1-201ENST00000624493 3152 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AC139769.1-204ENST00000472297 1931 ntBASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
PTCHD1Q96NR3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 UBBP2-201ENST00000376781 231 ntBASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 RNU6-306P-201ENST00000384617 107 ntBASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 RPL37P18-201ENST00000411602 243 ntBASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 Z99755.1-201ENST00000414048 380 ntBASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 AC016831.4-201ENST00000438302 307 ntBASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCHD1Q96NR3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms