Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
USP48Q86UV5 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP48Q86UV5 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
USP48Q86UV5 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USP48Q86UV5 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.22□□□□□ -1.57
USP48Q86UV5 Y_RNA.58-201ENST00000362807 102 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 Y_RNA.154-201ENST00000363624 102 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 Y_RNA.162-201ENST00000363683 102 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 RNY3P1-201ENST00000365085 102 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 SNORD115-7-201ENST00000365306 82 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 RNY3-201ENST00000365484 102 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 RNU6-38P-201ENST00000384085 107 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 Y_RNA.490-201ENST00000384413 102 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 RNU6-882P-201ENST00000391025 103 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 AC110754.1-201ENST00000399740 601 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 TXNP7-201ENST00000406296 293 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.22□□□□□ -1.57
USP48Q86UV5 PPP1R11P2-201ENST00000423543 382 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 AC093106.2-201ENST00000428212 385 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 COX6B1P7-201ENST00000430845 235 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 AL445584.1-201ENST00000431451 330 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.22□□□□□ -1.57
USP48Q86UV5 CYCSP43-201ENST00000438233 310 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 MTCYBP6-201ENST00000441810 138 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.22□□□□□ -1.57
USP48Q86UV5 RNU6-333P-201ENST00000459117 107 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 AP000942.1-201ENST00000463969 747 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 AC108078.2-201ENST00000510750 236 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 RNA5SP497-201ENST00000516081 97 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 RNU6-390P-201ENST00000516259 103 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.22□□□□□ -1.57
USP48Q86UV5 AC107953.1-201ENST00000522216 297 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.22□□□□□ -1.57
USP48Q86UV5 XIAPP1-201ENST00000603162 600 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 BPIFA4P-203ENST00000603168 689 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 HMGN2P28-201ENST00000606102 262 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.22□□□□□ -1.57
USP48Q86UV5 AL589994.2-201ENST00000621124 579 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
USP48Q86UV5 AC005858.4-201ENST00000623191 700 ntBASIC5.22□□□□□ -1.57
USP48Q86UV5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP48Q86UV5 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP48Q86UV5 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP48Q86UV5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
USP48Q86UV5 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
USP48Q86UV5 MAPK10-286ENST00000641208 8747 ntBASIC5.21□□□□□ -1.57
USP48Q86UV5 MTND4P35-201ENST00000604257 1375 ntBASIC5.21□□□□□ -1.58
USP48Q86UV5 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.21□□□□□ -1.58
USP48Q86UV5 SNORA63.1-201ENST00000362493 131 ntBASIC5.21□□□□□ -1.58
USP48Q86UV5 Y_RNA.100-201ENST00000363141 102 ntBASIC5.21□□□□□ -1.58
USP48Q86UV5 Y_RNA.419-201ENST00000384041 102 ntBASIC5.21□□□□□ -1.58
USP48Q86UV5 SOD2P1-201ENST00000396543 562 ntBASIC5.21□□□□□ -1.58
USP48Q86UV5 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.21□□□□□ -1.58
USP48Q86UV5 RPL7AP73-201ENST00000413490 353 ntBASIC5.21□□□□□ -1.58
USP48Q86UV5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.21□□□□□ -1.58
USP48Q86UV5 ARL5AP1-201ENST00000418991 388 ntBASIC5.21□□□□□ -1.58
USP48Q86UV5 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.21□□□□□ -1.58
USP48Q86UV5 RPL23AP25-201ENST00000430973 463 ntBASIC5.21□□□□□ -1.58
USP48Q86UV5 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.21□□□□□ -1.58
USP48Q86UV5 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.21□□□□□ -1.58
USP48Q86UV5 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP48Q86UV5 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.21□□□□□ -1.58
USP48Q86UV5 RNU7-180P-201ENST00000459240 63 ntBASIC5.21□□□□□ -1.58
USP48Q86UV5 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
USP48Q86UV5 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.21□□□□□ -1.58
USP48Q86UV5 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.21□□□□□ -1.58
USP48Q86UV5 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP48Q86UV5 PSMA3P-201ENST00000555485 635 ntBASIC5.21□□□□□ -1.58
USP48Q86UV5 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
USP48Q86UV5 AC012442.3-202ENST00000636742 206 ntBASIC5.21□□□□□ -1.58
USP48Q86UV5 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.21□□□□□ -1.58
USP48Q86UV5 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.58
USP48Q86UV5 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
USP48Q86UV5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP48Q86UV5 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
USP48Q86UV5 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.21□□□□□ -1.58
USP48Q86UV5 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.2□□□□□ -1.58
USP48Q86UV5 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
USP48Q86UV5 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
USP48Q86UV5 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP48Q86UV5 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
USP48Q86UV5 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP48Q86UV5 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
USP48Q86UV5 AC106871.1-201ENST00000568324 3102 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
USP48Q86UV5 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP48Q86UV5 RNU6-1287P-201ENST00000362914 107 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 RNU6-1060P-201ENST00000384664 107 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 Y_RNA.576-201ENST00000384781 102 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 MIR124-3-201ENST00000384866 87 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 RNA5SP36-201ENST00000410197 133 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 Y_RNA.615-201ENST00000410769 117 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 AL160275.2-201ENST00000412010 394 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 MTND3P8-201ENST00000412909 339 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 AC093578.1-201ENST00000415219 368 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 AF228730.4-201ENST00000421457 183 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 AL645937.1-202ENST00000421799 937 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 AC005534.2-201ENST00000431047 433 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 IFNA20P-201ENST00000436840 528 ntBASIC5.2□□□□□ -1.58
USP48Q86UV5 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms