Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.25□□□□□ -1.57
GPC1P35052 AL162424.1-201ENST00000602325 221 ntBASIC5.25□□□□□ -1.57
GPC1P35052 AL139124.1-201ENST00000609123 421 ntBASIC5.25□□□□□ -1.57
GPC1P35052 AL590240.4-201ENST00000616908 390 ntBASIC5.25□□□□□ -1.57
GPC1P35052 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.25□□□□□ -1.57
GPC1P35052 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GPC1P35052 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
GPC1P35052 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
GPC1P35052 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GPC1P35052 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GPC1P35052 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GPC1P35052 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
GPC1P35052 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.25□□□□□ -1.57
GPC1P35052 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
GPC1P35052 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.25□□□□□ -1.57
GPC1P35052 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
GPC1P35052 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
GPC1P35052 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
GPC1P35052 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GPC1P35052 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.24□□□□□ -1.57
GPC1P35052 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
GPC1P35052 AL022322.2-201ENST00000624072 20397 ntBASIC5.24□□□□□ -1.57
GPC1P35052 RN7SKP227-201ENST00000364445 330 ntBASIC5.24□□□□□ -1.57
GPC1P35052 SNORD56.6-201ENST00000384569 71 ntBASIC5.24□□□□□ -1.57
GPC1P35052 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.24□□□□□ -1.57
GPC1P35052 HMGN1P20-201ENST00000411849 300 ntBASIC5.24□□□□□ -1.57
GPC1P35052 OR2AT2P-201ENST00000413438 905 ntBASIC5.24□□□□□ -1.57
GPC1P35052 TMSB10P2-201ENST00000416049 131 ntBASIC5.24□□□□□ -1.57
GPC1P35052 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.24□□□□□ -1.57
GPC1P35052 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.24□□□□□ -1.57
GPC1P35052 RPS20P1-201ENST00000434853 354 ntBASIC5.24□□□□□ -1.57
GPC1P35052 AC073465.2-201ENST00000440938 498 ntBASIC5.24□□□□□ -1.57
GPC1P35052 AC079354.2-201ENST00000453523 154 ntBASIC5.24□□□□□ -1.57
GPC1P35052 PPIAP21-201ENST00000464473 501 ntBASIC5.24□□□□□ -1.57
GPC1P35052 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.24□□□□□ -1.57
GPC1P35052 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.24□□□□□ -1.57
GPC1P35052 RNU7-175P-201ENST00000515915 61 ntBASIC5.24□□□□□ -1.57
GPC1P35052 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.24□□□□□ -1.57
GPC1P35052 EDDM3DP-201ENST00000554692 434 ntBASIC5.24□□□□□ -1.57
GPC1P35052 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.24□□□□□ -1.57
GPC1P35052 AC006272.2-201ENST00000594725 163 ntBASIC5.24□□□□□ -1.57
GPC1P35052 AC037487.3-201ENST00000606668 112 ntBASIC5.24□□□□□ -1.57
GPC1P35052 MIR6133-201ENST00000617057 108 ntBASIC5.24□□□□□ -1.57
GPC1P35052 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.24□□□□□ -1.57
GPC1P35052 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GPC1P35052 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC5.24□□□□□ -1.57
GPC1P35052 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.24□□□□□ -1.57
GPC1P35052 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
GPC1P35052 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
GPC1P35052 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GPC1P35052 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.24□□□□□ -1.57
GPC1P35052 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
GPC1P35052 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GPC1P35052 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GPC1P35052 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
GPC1P35052 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.24□□□□□ -1.57
GPC1P35052 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
GPC1P35052 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GPC1P35052 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
GPC1P35052 SRRM1P3-201ENST00000426911 2678 ntBASIC5.23□□□□□ -1.57
GPC1P35052 AC083899.1-201ENST00000454465 3819 ntBASIC5.23□□□□□ -1.57
GPC1P35052 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
GPC1P35052 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GPC1P35052 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
GPC1P35052 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GPC1P35052 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GPC1P35052 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GPC1P35052 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
GPC1P35052 Y_RNA.233-201ENST00000364407 101 ntBASIC5.23□□□□□ -1.57
GPC1P35052 RNU6-1035P-201ENST00000384477 107 ntBASIC5.23□□□□□ -1.57
GPC1P35052 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.23□□□□□ -1.57
GPC1P35052 Y_RNA.590-201ENST00000410140 107 ntBASIC5.23□□□□□ -1.57
GPC1P35052 SNORD56-201ENST00000413522 71 ntBASIC5.23□□□□□ -1.57
GPC1P35052 HMGN2P27-201ENST00000427352 270 ntBASIC5.23□□□□□ -1.57
GPC1P35052 HSPD1P21-201ENST00000436541 245 ntBASIC5.23□□□□□ -1.57
GPC1P35052 AL163193.1-201ENST00000444895 788 ntBASIC5.23□□□□□ -1.57
GPC1P35052 AL589765.3-201ENST00000446084 462 ntBASIC5.23□□□□□ -1.57
GPC1P35052 KNOP1P3-201ENST00000446933 426 ntBASIC5.23□□□□□ -1.57
GPC1P35052 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.23□□□□□ -1.57
GPC1P35052 AL445665.1-202ENST00000452436 324 ntBASIC5.23□□□□□ -1.57
GPC1P35052 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.23□□□□□ -1.57
GPC1P35052 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.23□□□□□ -1.57
GPC1P35052 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.23□□□□□ -1.57
GPC1P35052 AK3P2-201ENST00000507976 429 ntBASIC5.23□□□□□ -1.57
GPC1P35052 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.23□□□□□ -1.57
GPC1P35052 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.23□□□□□ -1.57
GPC1P35052 RNU6-1012P-201ENST00000516606 109 ntBASIC5.23□□□□□ -1.57
GPC1P35052 RNU6-612P-201ENST00000516909 102 ntBASIC5.23□□□□□ -1.57
GPC1P35052 RNU6-1315P-201ENST00000517187 99 ntBASIC5.23□□□□□ -1.57
GPC1P35052 MIR2355-201ENST00000517199 87 ntBASIC5.23□□□□□ -1.57
GPC1P35052 SNORA43.3-201ENST00000517240 103 ntBASIC5.23□□□□□ -1.57
GPC1P35052 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.23□□□□□ -1.57
GPC1P35052 AP006245.1-201ENST00000522549 120 ntBASIC5.23□□□□□ -1.57
GPC1P35052 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.23□□□□□ -1.57
GPC1P35052 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.23□□□□□ -1.57
GPC1P35052 HMGB1P14-201ENST00000557424 591 ntBASIC5.23□□□□□ -1.57
GPC1P35052 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
GPC1P35052 RPL23AP78-201ENST00000599928 470 ntBASIC5.23□□□□□ -1.57
GPC1P35052 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.23□□□□□ -1.57
GPC1P35052 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms