Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 IGKV2D-36-201ENST00000518643 226 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 AC104997.1-201ENST00000519761 717 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 AC084851.1-201ENST00000529105 249 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A5P29400 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A5P29400 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.86□□□□□ -2.11
COL4A5P29400 RPL23AP88-201ENST00000605759 454 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.86□□□□□ -2.11
COL4A5P29400 BX649567.1-201ENST00000642071 1134 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL4A5P29400 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL4A5P29400 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL4A5P29400 RNU6-1293P-201ENST00000384077 107 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 ERHP2-201ENST00000402323 299 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 AC096632.1-201ENST00000427395 310 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.86□□□□□ -2.11
COL4A5P29400 RPS26P56-201ENST00000444468 240 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.86□□□□□ -2.11
COL4A5P29400 RPS24P6-201ENST00000452670 400 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.86□□□□□ -2.11
COL4A5P29400 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.86□□□□□ -2.11
COL4A5P29400 RNU6-711P-201ENST00000517255 106 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.86□□□□□ -2.11
COL4A5P29400 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.86□□□□□ -2.11
COL4A5P29400 AL731537.2-201ENST00000561565 951 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 OR4G1P-201ENST00000588632 938 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 AC242628.1-201ENST00000606810 391 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 AL157834.3-201ENST00000615543 103 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 RNU6-156P-201ENST00000621869 107 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 AL109659.3-201ENST00000624985 950 ntBASIC1.86□□□□□ -2.11
COL4A5P29400 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.86□□□□□ -2.11
COL4A5P29400 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL4A5P29400 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL4A5P29400 Y_RNA.36-201ENST00000362602 112 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 RNU6-1249P-201ENST00000363237 111 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 AL023807.1-201ENST00000407932 359 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 RNU6-272P-201ENST00000411028 104 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 AC010385.1-201ENST00000412374 256 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 OFD1P18Y-201ENST00000420889 959 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 AL034418.1-201ENST00000448675 860 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 AL109741.2-201ENST00000455561 343 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 RPS15AP1-201ENST00000457423 391 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 HMGN2P13-201ENST00000476476 274 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.85□□□□□ -2.11
COL4A5P29400 OR9N1P-202ENST00000494289 481 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 AC021146.8-201ENST00000507455 733 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 AC008526.1-201ENST00000509149 338 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 AC098799.2-201ENST00000509466 868 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.85□□□□□ -2.11
COL4A5P29400 SNORA31.8-201ENST00000516327 108 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 SNORA31.11-201ENST00000516528 139 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.85□□□□□ -2.11
COL4A5P29400 CBX3P2-202ENST00000583365 535 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 AC113368.1-201ENST00000603736 382 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 AL049779.4-201ENST00000604500 156 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 AC009032.1-201ENST00000617574 431 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.85□□□□□ -2.11
COL4A5P29400 AC006249.1-201ENST00000621223 471 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 AL136164.4-201ENST00000625013 2135 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.85□□□□□ -2.11
COL4A5P29400 AC083865.1-201ENST00000636634 831 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 AC017104.5-201ENST00000637647 639 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 AL136520.1-201ENST00000600311 1322 ntBASIC1.85□□□□□ -2.11
COL4A5P29400 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL4A5P29400 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
COL4A5P29400 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
COL4A5P29400 RNU6-1027P-201ENST00000383998 107 ntBASIC1.84□□□□□ -2.11
COL4A5P29400 AL591034.1-201ENST00000407447 340 ntBASIC1.84□□□□□ -2.11
COL4A5P29400 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.84□□□□□ -2.11
COL4A5P29400 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.84□□□□□ -2.11
COL4A5P29400 YWHAZP8-201ENST00000436935 731 ntBASIC1.84□□□□□ -2.11
COL4A5P29400 MTND4LP16-201ENST00000440828 295 ntBASIC1.84□□□□□ -2.11
COL4A5P29400 AL513321.1-201ENST00000441175 761 ntBASIC1.84□□□□□ -2.11
COL4A5P29400 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.84□□□□□ -2.11
COL4A5P29400 AC104308.1-201ENST00000454621 333 ntBASIC1.84□□□□□ -2.11
COL4A5P29400 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.84□□□□□ -2.11
COL4A5P29400 RPS23P3-201ENST00000470993 430 ntBASIC1.84□□□□□ -2.11
COL4A5P29400 HMGN1P7-201ENST00000491722 313 ntBASIC1.84□□□□□ -2.11
COL4A5P29400 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.84□□□□□ -2.11
COL4A5P29400 AC104108.1-201ENST00000509930 412 ntBASIC1.84□□□□□ -2.11
COL4A5P29400 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.84□□□□□ -2.11
COL4A5P29400 SNORD59.2-201ENST00000516873 68 ntBASIC1.84□□□□□ -2.11
COL4A5P29400 AP005660.1-201ENST00000522972 293 ntBASIC1.84□□□□□ -2.11
COL4A5P29400 CIR1P1-201ENST00000524055 1133 ntBASIC1.84□□□□□ -2.11
COL4A5P29400 AP002748.2-201ENST00000528671 348 ntBASIC1.84□□□□□ -2.11
COL4A5P29400 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.84□□□□□ -2.11
COL4A5P29400 AC016957.1-201ENST00000534895 309 ntBASIC1.84□□□□□ -2.11
COL4A5P29400 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.84□□□□□ -2.11
COL4A5P29400 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.84□□□□□ -2.11
COL4A5P29400 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.84□□□□□ -2.11
COL4A5P29400 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.84□□□□□ -2.11
COL4A5P29400 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
COL4A5P29400 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
COL4A5P29400 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
COL4A5P29400 AL109653.1-201ENST00000603091 248 ntBASIC1.84□□□□□ -2.11
COL4A5P29400 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
COL4A5P29400 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.84□□□□□ -2.11
COL4A5P29400 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.84□□□□□ -2.11
COL4A5P29400 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.84□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms