Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RNU6-395P-201ENST00000365662 106 ntBASIC5.09□□□□□ -1.59
THBS1P07996 Y_RNA.405-201ENST00000383979 100 ntBASIC5.09□□□□□ -1.59
THBS1P07996 Y_RNA.451-201ENST00000384200 100 ntBASIC5.09□□□□□ -1.59
THBS1P07996 Y_RNA.524-201ENST00000384564 100 ntBASIC5.09□□□□□ -1.59
THBS1P07996 Y_RNA.561-201ENST00000384694 100 ntBASIC5.09□□□□□ -1.59
THBS1P07996 RNU6-918P-201ENST00000391219 106 ntBASIC5.09□□□□□ -1.59
THBS1P07996 BMS1P17-202ENST00000416720 316 ntBASIC5.09□□□□□ -1.59
THBS1P07996 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.09□□□□□ -1.59
THBS1P07996 RANP8-201ENST00000444720 713 ntBASIC5.09□□□□□ -1.59
THBS1P07996 Y_RNA.650-201ENST00000459002 102 ntBASIC5.09□□□□□ -1.59
THBS1P07996 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.09□□□□□ -1.59
THBS1P07996 RPL37P6-202ENST00000464216 403 ntBASIC5.09□□□□□ -1.59
THBS1P07996 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.09□□□□□ -1.59
THBS1P07996 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.09□□□□□ -1.59
THBS1P07996 Y_RNA.777-201ENST00000516982 102 ntBASIC5.09□□□□□ -1.59
THBS1P07996 SNORA31.18-201ENST00000517043 134 ntBASIC5.09□□□□□ -1.59
THBS1P07996 IGKV2D-36-201ENST00000518643 226 ntBASIC5.09□□□□□ -1.59
THBS1P07996 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.09□□□□□ -1.59
THBS1P07996 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.09□□□□□ -1.59
THBS1P07996 AC007225.2-201ENST00000562529 256 ntBASIC5.09□□□□□ -1.59
THBS1P07996 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.09□□□□□ -1.59
THBS1P07996 MIR4443-201ENST00000585052 53 ntBASIC5.09□□□□□ -1.59
THBS1P07996 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.09□□□□□ -1.59
THBS1P07996 Y_RNA.771-201ENST00000598668 102 ntBASIC5.09□□□□□ -1.59
THBS1P07996 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.09□□□□□ -1.59
THBS1P07996 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.09□□□□□ -1.59
THBS1P07996 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.09□□□□□ -1.59
THBS1P07996 Y_RNA.789-201ENST00000622480 102 ntBASIC5.09□□□□□ -1.59
THBS1P07996 AC091895.1-201ENST00000624494 256 ntBASIC5.09□□□□□ -1.59
THBS1P07996 AL049767.1-202ENST00000637826 242 ntBASIC5.09□□□□□ -1.59
THBS1P07996 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.09□□□□□ -1.59
THBS1P07996 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.09□□□□□ -1.59
THBS1P07996 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
THBS1P07996 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.09□□□□□ -1.59
THBS1P07996 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
THBS1P07996 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
THBS1P07996 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
THBS1P07996 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.09□□□□□ -1.6
THBS1P07996 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
THBS1P07996 AC100757.1-201ENST00000616872 1835 ntBASIC5.09□□□□□ -1.6
THBS1P07996 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
THBS1P07996 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
THBS1P07996 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
THBS1P07996 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
THBS1P07996 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
THBS1P07996 AP000756.2-201ENST00000624168 2567 ntBASIC5.09□□□□□ -1.6
THBS1P07996 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
THBS1P07996 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
THBS1P07996 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
THBS1P07996 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
THBS1P07996 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.08□□□□□ -1.6
THBS1P07996 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
THBS1P07996 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
THBS1P07996 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
THBS1P07996 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
THBS1P07996 SRRM1P3-201ENST00000426911 2678 ntBASIC5.08□□□□□ -1.6
THBS1P07996 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
THBS1P07996 ZNF826P-207ENST00000622273 1910 ntBASIC5.08□□□□□ -1.6
THBS1P07996 SNORA25.1-201ENST00000362326 128 ntBASIC5.08□□□□□ -1.6
THBS1P07996 RNA5SP132-201ENST00000364725 118 ntBASIC5.08□□□□□ -1.6
THBS1P07996 Y_RNA.275-201ENST00000364726 110 ntBASIC5.08□□□□□ -1.6
THBS1P07996 Y_RNA.441-201ENST00000384123 112 ntBASIC5.08□□□□□ -1.6
THBS1P07996 Y_RNA.497-201ENST00000384447 98 ntBASIC5.08□□□□□ -1.6
THBS1P07996 MIR135A2-201ENST00000384854 100 ntBASIC5.08□□□□□ -1.6
THBS1P07996 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
THBS1P07996 RNU2-43P-201ENST00000410306 190 ntBASIC5.08□□□□□ -1.6
THBS1P07996 RNU6-1135P-201ENST00000411083 103 ntBASIC5.08□□□□□ -1.6
THBS1P07996 AC092447.6-201ENST00000414578 210 ntBASIC5.08□□□□□ -1.6
THBS1P07996 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.08□□□□□ -1.6
THBS1P07996 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.08□□□□□ -1.6
THBS1P07996 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.08□□□□□ -1.6
THBS1P07996 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.08□□□□□ -1.6
THBS1P07996 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.08□□□□□ -1.6
THBS1P07996 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
THBS1P07996 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.08□□□□□ -1.6
THBS1P07996 AC090617.3-201ENST00000573670 475 ntBASIC5.08□□□□□ -1.6
THBS1P07996 MIR1273C-201ENST00000578669 77 ntBASIC5.08□□□□□ -1.6
THBS1P07996 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.08□□□□□ -1.6
THBS1P07996 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
THBS1P07996 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.08□□□□□ -1.6
THBS1P07996 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.08□□□□□ -1.6
THBS1P07996 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.08□□□□□ -1.6
THBS1P07996 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
THBS1P07996 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
THBS1P07996 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.08□□□□□ -1.6
THBS1P07996 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.08□□□□□ -1.6
THBS1P07996 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.07□□□□□ -1.6
THBS1P07996 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
THBS1P07996 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.07□□□□□ -1.6
THBS1P07996 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
THBS1P07996 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
THBS1P07996 SNORA22C-201ENST00000384614 134 ntBASIC5.07□□□□□ -1.6
THBS1P07996 AL391361.1-201ENST00000405580 489 ntBASIC5.07□□□□□ -1.6
THBS1P07996 Y_RNA.623-201ENST00000411128 95 ntBASIC5.07□□□□□ -1.6
THBS1P07996 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.07□□□□□ -1.6
THBS1P07996 AC016769.2-201ENST00000414815 475 ntBASIC5.07□□□□□ -1.6
THBS1P07996 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.07□□□□□ -1.6
THBS1P07996 OR6D1P-201ENST00000436165 939 ntBASIC5.07□□□□□ -1.6
THBS1P07996 RPL36AP39-201ENST00000445859 318 ntBASIC5.07□□□□□ -1.6
THBS1P07996 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms