Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA2O43364 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA2O43364 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXA2O43364 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXA2O43364 AL078621.3-201ENST00000623707 2042 ntBASIC5.87□□□□□ -1.47
HOXA2O43364 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA2O43364 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA2O43364 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
HOXA2O43364 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA2O43364 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA2O43364 MIR412-201ENST00000362142 91 ntBASIC5.87□□□□□ -1.47
HOXA2O43364 RNU4-90P-201ENST00000362773 141 ntBASIC5.87□□□□□ -1.47
HOXA2O43364 RN7SKP227-201ENST00000364445 330 ntBASIC5.87□□□□□ -1.47
HOXA2O43364 SNORD50.2-201ENST00000365465 70 ntBASIC5.87□□□□□ -1.47
HOXA2O43364 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HOXA2O43364 RNU2-20P-201ENST00000410425 191 ntBASIC5.87□□□□□ -1.47
HOXA2O43364 AL513331.1-201ENST00000411908 397 ntBASIC5.87□□□□□ -1.47
HOXA2O43364 AC017079.2-201ENST00000416102 485 ntBASIC5.87□□□□□ -1.47
HOXA2O43364 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.87□□□□□ -1.47
HOXA2O43364 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXA2O43364 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXA2O43364 RPL12P39-201ENST00000455456 496 ntBASIC5.87□□□□□ -1.47
HOXA2O43364 RNU7-175P-201ENST00000515915 61 ntBASIC5.87□□□□□ -1.47
HOXA2O43364 RNU6-612P-201ENST00000516909 102 ntBASIC5.87□□□□□ -1.47
HOXA2O43364 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.87□□□□□ -1.47
HOXA2O43364 AP006245.1-201ENST00000522549 120 ntBASIC5.87□□□□□ -1.47
HOXA2O43364 AC025884.1-201ENST00000556034 378 ntBASIC5.87□□□□□ -1.47
HOXA2O43364 AL049539.1-201ENST00000611964 459 ntBASIC5.87□□□□□ -1.47
HOXA2O43364 AC240442.1-201ENST00000616055 283 ntBASIC5.87□□□□□ -1.47
HOXA2O43364 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXA2O43364 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXA2O43364 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA2O43364 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXA2O43364 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
HOXA2O43364 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXA2O43364 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXA2O43364 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HOXA2O43364 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
HOXA2O43364 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXA2O43364 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HOXA2O43364 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HOXA2O43364 RNA5SP326-201ENST00000363209 110 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 U3.6-201ENST00000363622 211 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 RNU6-937P-201ENST00000384325 106 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 SNORA53-201ENST00000391141 249 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXA2O43364 AL117339.3-201ENST00000418733 162 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 MRPS21P2-201ENST00000424704 264 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXA2O43364 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXA2O43364 IFNWP4-201ENST00000453148 294 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXA2O43364 snoU13.3-201ENST00000459441 104 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 SNORD125-201ENST00000459538 96 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 ANXA2P1-201ENST00000505539 926 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 AK3P2-201ENST00000507976 429 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 Y_RNA.662-201ENST00000516028 97 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 RN7SKP66-201ENST00000516681 231 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXA2O43364 AP005403.1-201ENST00000579720 229 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXA2O43364 AC093799.2-201ENST00000610062 578 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 AL360270.2-201ENST00000562952 5985 ntBASIC5.86□□□□□ -1.47
HOXA2O43364 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXA2O43364 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXA2O43364 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXA2O43364 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXA2O43364 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXA2O43364 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXA2O43364 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
HOXA2O43364 NCAPGP1-201ENST00000505112 1814 ntBASIC5.85□□□□□ -1.47
HOXA2O43364 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXA2O43364 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
HOXA2O43364 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXA2O43364 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.85□□□□□ -1.47
HOXA2O43364 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXA2O43364 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXA2O43364 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HOXA2O43364 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.85□□□□□ -1.47
HOXA2O43364 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
HOXA2O43364 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXA2O43364 RNU6-512P-201ENST00000364438 103 ntBASIC5.85□□□□□ -1.47
HOXA2O43364 SNORA36C-201ENST00000384289 132 ntBASIC5.85□□□□□ -1.47
HOXA2O43364 SNORA16A-201ENST00000384342 137 ntBASIC5.85□□□□□ -1.47
HOXA2O43364 RNU1-106P-201ENST00000384382 164 ntBASIC5.85□□□□□ -1.47
HOXA2O43364 RNU6-102P-201ENST00000384485 104 ntBASIC5.85□□□□□ -1.47
HOXA2O43364 RNU6-837P-201ENST00000391056 108 ntBASIC5.85□□□□□ -1.47
HOXA2O43364 RNU6-1025P-201ENST00000410629 104 ntBASIC5.85□□□□□ -1.47
HOXA2O43364 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXA2O43364 AC034236.1-201ENST00000469891 373 ntBASIC5.85□□□□□ -1.47
HOXA2O43364 RNA5SP471-201ENST00000516971 106 ntBASIC5.85□□□□□ -1.47
HOXA2O43364 AC024940.3-201ENST00000538551 316 ntBASIC5.85□□□□□ -1.47
HOXA2O43364 AC122688.1-201ENST00000541494 223 ntBASIC5.85□□□□□ -1.47
HOXA2O43364 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.85□□□□□ -1.47
HOXA2O43364 EDDM3DP-201ENST00000554692 434 ntBASIC5.85□□□□□ -1.47
HOXA2O43364 AC103996.1-201ENST00000555468 102 ntBASIC5.85□□□□□ -1.47
HOXA2O43364 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.85□□□□□ -1.47
HOXA2O43364 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXA2O43364 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms