Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC091965.2-201ENST00000512324 613 ntBASIC1.1□□□□□ -2.23
UBE2D4Q9Y2X8 RNU6-548P-201ENST00000517083 115 ntBASIC1.1□□□□□ -2.23
UBE2D4Q9Y2X8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
UBE2D4Q9Y2X8 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.1□□□□□ -2.23
UBE2D4Q9Y2X8 MIR3945-201ENST00000581853 98 ntBASIC1.1□□□□□ -2.23
UBE2D4Q9Y2X8 MIR3609-201ENST00000582661 80 ntBASIC1.1□□□□□ -2.23
UBE2D4Q9Y2X8 AP001330.4-201ENST00000604350 154 ntBASIC1.1□□□□□ -2.23
UBE2D4Q9Y2X8 AC106900.2-201ENST00000604994 317 ntBASIC1.1□□□□□ -2.23
UBE2D4Q9Y2X8 MIR6715A-201ENST00000615929 79 ntBASIC1.1□□□□□ -2.23
UBE2D4Q9Y2X8 HPVC1-201ENST00000629899 1198 ntBASIC1.1□□□□□ -2.23
UBE2D4Q9Y2X8 AC130650.2-201ENST00000618736 2403 ntBASIC1.1□□□□□ -2.23
UBE2D4Q9Y2X8 DDX10P1-201ENST00000448545 1933 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 MIR320A-201ENST00000385302 82 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 SNORA40.18-201ENST00000391200 128 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 RN7SKP51-201ENST00000410781 304 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 MTCO3P4-201ENST00000419236 787 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 BX276092.3-201ENST00000424182 230 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 EIF4EP4-201ENST00000424916 578 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 USP12PX-201ENST00000432383 1057 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AL121890.1-201ENST00000435457 205 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 ARPC3P1-201ENST00000437218 533 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC004383.1-201ENST00000438135 289 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 MED6P1-201ENST00000439659 713 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC010095.1-201ENST00000443543 144 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 RPS15AP27-201ENST00000449183 343 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AL359385.1-201ENST00000456509 365 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC008481.1-201ENST00000463278 396 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC023790.1-201ENST00000482174 347 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC026801.1-201ENST00000497178 464 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 RPL23AP63-201ENST00000498752 471 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC108157.1-201ENST00000510511 539 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC093770.1-201ENST00000511559 571 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC016065.2-201ENST00000514530 444 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 HMGB1P1-201ENST00000522557 636 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 EEF1A1P37-201ENST00000522748 715 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC027807.1-201ENST00000559921 996 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 MIR4298-201ENST00000584380 73 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 XIAPP1-201ENST00000603162 600 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC002487.1-201ENST00000604565 994 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 MIR502-201ENST00000606349 86 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC012213.4-201ENST00000606457 354 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC003001.2-201ENST00000616294 831 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 MKKS-204ENST00000639674 192 ntBASIC1.09□□□□□ -2.23
UBE2D4Q9Y2X8 AC087359.1-201ENST00000508335 1740 ntBASIC1.09□□□□□ -2.24
UBE2D4Q9Y2X8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 RNU6-198P-201ENST00000384258 104 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 MIR504-201ENST00000385065 83 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 U3.29-201ENST00000391296 212 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 SSR1P1-201ENST00000407630 814 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 RNA5SP270-201ENST00000411361 118 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 BX510359.4-201ENST00000423750 193 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 RPL7L1P10-201ENST00000427790 463 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 Z80107.1-201ENST00000436830 412 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 FDX1P2-201ENST00000450769 375 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 USP9YP10-201ENST00000454868 628 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 BX248409.1-201ENST00000455497 255 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 AC087884.1-201ENST00000469738 328 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 TRBV1-201ENST00000476502 284 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 AC011352.3-201ENST00000505162 593 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 RNU6-250P-201ENST00000516958 103 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 SNORA31.25-201ENST00000517242 134 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 IGKV2-36-201ENST00000519999 223 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 AL442163.2-201ENST00000553912 710 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 MIR4285-201ENST00000581001 85 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 BX248123.2-201ENST00000606318 124 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 AC080128.1-201ENST00000474389 1917 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 AC008555.8-201ENST00000623602 2168 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 AC123912.3-201ENST00000600907 1367 ntBASIC1.08□□□□□ -2.24
UBE2D4Q9Y2X8 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
UBE2D4Q9Y2X8 RNU5D-1-201ENST00000363299 116 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms