Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 RLIMP1-201ENST00000339626 1680 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-595P-201ENST00000363944 107 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-701P-201ENST00000384059 107 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 SNORA5.1-201ENST00000384275 131 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-804P-201ENST00000384286 107 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 Y_RNA.533-201ENST00000384596 114 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-1168P-201ENST00000390831 104 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 AL590704.1-201ENST00000402856 794 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-325P-201ENST00000411132 105 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 AC092017.2-201ENST00000427600 362 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 RPL23AP22-201ENST00000437556 453 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 GAPDHP27-201ENST00000447427 1020 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 AC008481.1-201ENST00000463278 396 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-677P-201ENST00000516914 101 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 OR1M4P-201ENST00000589199 287 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 AL590240.4-201ENST00000616908 390 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 AC018809.2-201ENST00000602436 3823 ntBASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
CUEDC1Q9NWM3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 AC004076.2-201ENST00000620532 3323 ntBASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 AC004817.4-201ENST00000602396 3625 ntBASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 RN7SKP124-201ENST00000364730 341 ntBASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-47P-201ENST00000383866 107 ntBASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 AL513475.1-201ENST00000406602 315 ntBASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 AL160275.3-201ENST00000423876 471 ntBASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 RPS6P12-201ENST00000432491 726 ntBASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 TMEM183AP1-205ENST00000432739 290 ntBASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 ISCUP1-201ENST00000454451 448 ntBASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 AC087477.1-201ENST00000465747 340 ntBASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 SYF2P1-201ENST00000550658 413 ntBASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 AL121603.1-201ENST00000553815 142 ntBASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 AL442163.3-201ENST00000554110 156 ntBASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 MIR4311-201ENST00000580794 100 ntBASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CUEDC1Q9NWM3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 AC007785.2-201ENST00000598627 1916 ntBASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CUEDC1Q9NWM3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms