Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RPS3AP52-201ENST00000435639 297 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.9□□□□□ -1.63
BRF1Q92994 Y_RNA.635-201ENST00000459041 101 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.9□□□□□ -1.63
BRF1Q92994 RPL37P6-202ENST00000464216 403 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 AC012181.1-201ENST00000479895 423 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.9□□□□□ -1.63
BRF1Q92994 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.9□□□□□ -1.63
BRF1Q92994 RNU6-559P-201ENST00000516151 98 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 Y_RNA.718-201ENST00000517110 102 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.9□□□□□ -1.63
BRF1Q92994 AP003385.6-201ENST00000531603 374 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 CR383656.7-201ENST00000548164 174 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.9□□□□□ -1.63
BRF1Q92994 SNRPGP17-201ENST00000603780 214 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 CTHRC1P1-201ENST00000605383 469 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 AC012603.1-201ENST00000606424 528 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 MIR7702-201ENST00000621931 59 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 MIR7641-1-201ENST00000627518 61 ntBASIC4.9□□□□□ -1.63
BRF1Q92994 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.9□□□□□ -1.63
BRF1Q92994 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
BRF1Q92994 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.9□□□□□ -1.63
BRF1Q92994 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BRF1Q92994 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.9□□□□□ -1.63
BRF1Q92994 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
BRF1Q92994 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
BRF1Q92994 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
BRF1Q92994 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.9□□□□□ -1.63
BRF1Q92994 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.89□□□□□ -1.63
BRF1Q92994 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRF1Q92994 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
BRF1Q92994 RNU6-474P-201ENST00000384243 107 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 SNORD116-29-201ENST00000384516 83 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
BRF1Q92994 RNU11-4P-201ENST00000391149 133 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRF1Q92994 BX323014.1-201ENST00000412876 237 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.89□□□□□ -1.63
BRF1Q92994 AL590609.2-201ENST00000421430 368 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 RPS27AP12-201ENST00000429552 465 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.89□□□□□ -1.63
BRF1Q92994 RPL23AP46-201ENST00000438548 490 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.89□□□□□ -1.63
BRF1Q92994 RNU7-152P-201ENST00000458982 64 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 AC006463.2-201ENST00000473326 348 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 AC091167.1-201ENST00000492017 396 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 CCDC34P1-201ENST00000507441 517 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 AC017037.1-201ENST00000508460 471 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.89□□□□□ -1.63
BRF1Q92994 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.89□□□□□ -1.63
BRF1Q92994 AC099522.1-202ENST00000514718 367 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 RN7SKP234-201ENST00000517173 224 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.89□□□□□ -1.63
BRF1Q92994 PTP4A1P6-201ENST00000531034 478 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 AC022882.1-201ENST00000532142 501 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 AP000889.2-201ENST00000532684 490 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.89□□□□□ -1.63
BRF1Q92994 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.89□□□□□ -1.63
BRF1Q92994 AP001330.4-201ENST00000604350 154 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 AC116312.1-201ENST00000606841 314 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BRF1Q92994 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.89□□□□□ -1.63
BRF1Q92994 AL450326.2-201ENST00000421913 1962 ntBASIC4.89□□□□□ -1.63
BRF1Q92994 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.88□□□□□ -1.63
BRF1Q92994 MTCO1P9-201ENST00000505577 1534 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRF1Q92994 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRF1Q92994 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BRF1Q92994 RNU6-989P-201ENST00000362756 107 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 RNU6-188P-201ENST00000364207 107 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.88□□□□□ -1.63
BRF1Q92994 Y_RNA.576-201ENST00000384781 102 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 SOD2P1-201ENST00000396543 562 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 MIR548K-201ENST00000408406 116 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 RNU4-46P-201ENST00000410818 138 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 AC016769.2-201ENST00000414815 475 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 PTMAP3-201ENST00000447474 330 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.88□□□□□ -1.63
BRF1Q92994 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.88□□□□□ -1.63
BRF1Q92994 Y_RNA.631-201ENST00000459607 101 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 AC130509.1-201ENST00000464158 433 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 AC083904.1-201ENST00000487828 231 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.88□□□□□ -1.63
BRF1Q92994 HMGB3P15-201ENST00000507326 574 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 AC098591.2-201ENST00000510152 315 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.88□□□□□ -1.63
BRF1Q92994 RAB9BP1-201ENST00000519581 626 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 AC103783.1-201ENST00000520506 373 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 ELOCP31-201ENST00000540463 467 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.88□□□□□ -1.63
BRF1Q92994 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.88□□□□□ -1.63
BRF1Q92994 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.88□□□□□ -1.63
BRF1Q92994 MIR3138-201ENST00000585238 82 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 MIR3942-201ENST00000585264 109 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 AC006504.6-201ENST00000590142 199 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 AC006254.3-201ENST00000603353 884 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 AL008729.2-201ENST00000606393 473 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 AL355802.3-201ENST00000607571 545 ntBASIC4.88□□□□□ -1.63
BRF1Q92994 AL357559.1-201ENST00000622228 274 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms