Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 RNU6-1038P-201ENST00000516516 104 ntBASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 RNU6-685P-201ENST00000517088 95 ntBASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 AP001804.3-201ENST00000525146 880 ntBASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 AC093249.1-201ENST00000567049 203 ntBASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 AC106782.4-201ENST00000568264 210 ntBASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 BNIP3P25-201ENST00000596023 559 ntBASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 LLPHP1-201ENST00000603571 367 ntBASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 AL138889.2-201ENST00000603883 242 ntBASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 AC019278.1-201ENST00000623516 479 ntBASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 AP001273.1-201ENST00000624493 3152 ntBASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 BTBD10P1-201ENST00000549824 1352 ntBASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 NEAT1-202ENST00000501122 22743 ntBASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 MAPK10-303ENST00000641324 3959 ntBASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SH3RF2Q8TEC5 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.46□□□□□ -1.69
SH3RF2Q8TEC5 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
SH3RF2Q8TEC5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 SPRR2C-201ENST00000290702 219 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 RNA5SP307-201ENST00000362863 116 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 SMIM11P1-201ENST00000369586 178 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 SNORA37-201ENST00000384504 129 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 RNU2-43P-201ENST00000410306 190 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 SNORA74C-2-201ENST00000411179 201 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 AC093106.2-201ENST00000428212 385 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 CYCSP43-201ENST00000438233 310 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 BRK1P2-201ENST00000442875 223 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 AC096576.1-201ENST00000489014 359 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 AL592156.1-201ENST00000508758 304 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 RN7SKP13-201ENST00000515933 244 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 RNU6-390P-201ENST00000516259 103 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 OR11H5P-201ENST00000554039 926 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 FRG2DP-202ENST00000566967 323 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 HNRNPCP4-201ENST00000571636 900 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 AC008521.1-201ENST00000587471 187 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 POLR3GP2-201ENST00000588366 668 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 AC012669.1-201ENST00000603209 283 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 AC092747.3-201ENST00000603769 301 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 CTHRC1P1-201ENST00000605383 469 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 Z82243.1-201ENST00000609432 473 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 FAM27D1-201ENST00000612308 341 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 SNX18P1Y-201ENST00000616231 511 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 MAPK10-320ENST00000641462 6696 ntBASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SH3RF2Q8TEC5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 Y_RNA.128-201ENST00000363391 112 ntBASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 Y_RNA.138-201ENST00000363462 102 ntBASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 SNORA23-201ENST00000365128 182 ntBASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 AC110754.1-201ENST00000399740 601 ntBASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 AC074085.1-201ENST00000413598 418 ntBASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 VN1R36P-201ENST00000414936 291 ntBASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 AL139396.1-201ENST00000421137 167 ntBASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 COX6B1P7-201ENST00000430845 235 ntBASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 HSFY6P-201ENST00000445573 403 ntBASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 GAPDHP27-201ENST00000447427 1020 ntBASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 RPL7L1P1-201ENST00000448259 785 ntBASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 SCARNA18-201ENST00000459004 134 ntBASIC4.45□□□□□ -1.7
SH3RF2Q8TEC5 MTND4P17-201ENST00000470444 350 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms