Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.15□□□□□ -1.91
PTCH1Q13635 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.15□□□□□ -1.91
PTCH1Q13635 MED28P6-201ENST00000558776 231 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 AC090695.1-201ENST00000561269 1222 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 OR4K7P-201ENST00000580232 945 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 AL022099.1-201ENST00000604551 712 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 AC091946.2-201ENST00000606105 291 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 AC009570.1-201ENST00000609599 745 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 MIR6845-201ENST00000613182 61 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 MIR6076-201ENST00000617521 113 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 AC006249.1-201ENST00000621223 471 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.15□□□□□ -1.91
PTCH1Q13635 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.15□□□□□ -1.91
PTCH1Q13635 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
PTCH1Q13635 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PTCH1Q13635 MAPK10-322ENST00000641485 4530 ntBASIC3.15□□□□□ -1.91
PTCH1Q13635 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.14□□□□□ -1.91
PTCH1Q13635 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PTCH1Q13635 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTCH1Q13635 FRG1BP-201ENST00000278882 761 ntBASIC3.14□□□□□ -1.91
PTCH1Q13635 RNU5D-1-201ENST00000363299 116 ntBASIC3.14□□□□□ -1.91
PTCH1Q13635 MIR221-201ENST00000385135 110 ntBASIC3.14□□□□□ -1.91
PTCH1Q13635 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PTCH1Q13635 SAR1AP2-201ENST00000392696 594 ntBASIC3.14□□□□□ -1.91
PTCH1Q13635 RN7SKP32-201ENST00000410167 303 ntBASIC3.14□□□□□ -1.91
PTCH1Q13635 BTF3P8-201ENST00000414577 526 ntBASIC3.14□□□□□ -1.91
PTCH1Q13635 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.14□□□□□ -1.91
PTCH1Q13635 AC013410.2-201ENST00000422627 201 ntBASIC3.14□□□□□ -1.91
PTCH1Q13635 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.14□□□□□ -1.91
PTCH1Q13635 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.14□□□□□ -1.91
PTCH1Q13635 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.14□□□□□ -1.91
PTCH1Q13635 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.14□□□□□ -1.91
PTCH1Q13635 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.14□□□□□ -1.91
PTCH1Q13635 RPL36AP21-201ENST00000490372 323 ntBASIC3.14□□□□□ -1.91
PTCH1Q13635 CBX3P3-201ENST00000508108 532 ntBASIC3.14□□□□□ -1.91
PTCH1Q13635 MTCO3P27-201ENST00000514397 196 ntBASIC3.14□□□□□ -1.91
PTCH1Q13635 SCARNA17.1-201ENST00000516211 143 ntBASIC3.14□□□□□ -1.91
PTCH1Q13635 SCARNA17.2-201ENST00000516334 143 ntBASIC3.14□□□□□ -1.91
PTCH1Q13635 SCARNA16.3-201ENST00000516595 184 ntBASIC3.14□□□□□ -1.91
PTCH1Q13635 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.14□□□□□ -1.91
PTCH1Q13635 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.14□□□□□ -1.91
PTCH1Q13635 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.14□□□□□ -1.91
PTCH1Q13635 AC023043.2-201ENST00000589678 1026 ntBASIC3.14□□□□□ -1.91
PTCH1Q13635 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.14□□□□□ -1.91
PTCH1Q13635 AC103710.2-201ENST00000609912 942 ntBASIC3.14□□□□□ -1.91
PTCH1Q13635 SCARNA17.4-201ENST00000614296 143 ntBASIC3.14□□□□□ -1.91
PTCH1Q13635 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.14□□□□□ -1.91
PTCH1Q13635 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTCH1Q13635 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.14□□□□□ -1.91
PTCH1Q13635 AC009487.4-201ENST00000624969 3585 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.13□□□□□ -1.91
PTCH1Q13635 MTND5P29-201ENST00000458676 1807 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 RNU1-17P-201ENST00000363022 152 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 Y_RNA.269-201ENST00000364685 89 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 DEFA7P-201ENST00000382676 285 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 AL023284.1-201ENST00000403956 276 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 PSMA6P3-201ENST00000428242 164 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 AC098826.1-201ENST00000433943 471 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 AL121871.1-201ENST00000443413 436 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 OR6K5P-201ENST00000447050 945 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 AC244505.3-201ENST00000454598 187 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.13□□□□□ -1.91
PTCH1Q13635 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.13□□□□□ -1.91
PTCH1Q13635 AC010265.1-201ENST00000513509 211 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.13□□□□□ -1.91
PTCH1Q13635 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.13□□□□□ -1.91
PTCH1Q13635 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.13□□□□□ -1.91
PTCH1Q13635 BNIP3P24-201ENST00000593398 557 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 AC106791.2-201ENST00000604680 391 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 AL451074.6-201ENST00000608512 729 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 AL592148.2-201ENST00000612210 372 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 AL353748.2-201ENST00000622148 471 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTCH1Q13635 AL157770.1-201ENST00000623049 439 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 AL356585.4-201ENST00000623078 1229 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 MIR219B-201ENST00000637023 88 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PTCH1Q13635 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTCH1Q13635 AL136520.1-201ENST00000600311 1322 ntBASIC3.13□□□□□ -1.91
PTCH1Q13635 RNU6-1176P-201ENST00000390955 107 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 AL603865.2-201ENST00000401679 213 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 AL136372.1-201ENST00000403060 228 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 SSXP9-201ENST00000417503 292 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 MTND2P9-201ENST00000422293 931 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 TMEM167AP1-201ENST00000423409 219 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.12□□□□□ -1.91
PTCH1Q13635 UBE2V1P6-201ENST00000430840 422 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 HSFY7P-201ENST00000432672 318 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 HSFY8P-201ENST00000437934 318 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 HSFY5P-201ENST00000453726 309 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 AC104472.2-201ENST00000469035 601 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 AC006483.1-201ENST00000487308 313 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.12□□□□□ -1.91
PTCH1Q13635 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 RNA5SP200-201ENST00000516360 103 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.12□□□□□ -1.91
PTCH1Q13635 AC005951.1-201ENST00000576706 485 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.12□□□□□ -1.91
PTCH1Q13635 AL031176.1-201ENST00000604554 466 ntBASIC3.12□□□□□ -1.91
PTCH1Q13635 AC105148.1-201ENST00000604961 409 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms