Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.42□□□□□ -1.86
GPC4O75487 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.42□□□□□ -1.86
GPC4O75487 MIR4293-201ENST00000584305 78 ntBASIC3.42□□□□□ -1.86
GPC4O75487 AC005771.1-201ENST00000585581 349 ntBASIC3.42□□□□□ -1.86
GPC4O75487 NBR2-204ENST00000587322 63 ntBASIC3.42□□□□□ -1.86
GPC4O75487 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.42□□□□□ -1.86
GPC4O75487 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.42□□□□□ -1.86
GPC4O75487 AC087752.4-201ENST00000605911 462 ntBASIC3.42□□□□□ -1.86
GPC4O75487 AC090582.1-201ENST00000636321 199 ntBASIC3.42□□□□□ -1.86
GPC4O75487 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
GPC4O75487 AC005832.2-201ENST00000538921 1430 ntBASIC3.42□□□□□ -1.86
GPC4O75487 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.42□□□□□ -1.86
GPC4O75487 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
GPC4O75487 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
GPC4O75487 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.42□□□□□ -1.86
GPC4O75487 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
GPC4O75487 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
GPC4O75487 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
GPC4O75487 AC058791.1-201ENST00000608412 3198 ntBASIC3.41□□□□□ -1.86
GPC4O75487 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
GPC4O75487 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
GPC4O75487 AC093908.1-201ENST00000623125 8092 ntBASIC3.41□□□□□ -1.86
GPC4O75487 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.41□□□□□ -1.86
GPC4O75487 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.41□□□□□ -1.86
GPC4O75487 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.41□□□□□ -1.86
GPC4O75487 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
GPC4O75487 RNU5A-1-201ENST00000362698 116 ntBASIC3.41□□□□□ -1.86
GPC4O75487 RNU4-1-201ENST00000363925 141 ntBASIC3.41□□□□□ -1.86
GPC4O75487 RNU5A-8P-201ENST00000364102 114 ntBASIC3.41□□□□□ -1.86
GPC4O75487 MIR493-201ENST00000385254 89 ntBASIC3.41□□□□□ -1.86
GPC4O75487 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
GPC4O75487 RNA5SP107-201ENST00000411358 122 ntBASIC3.41□□□□□ -1.86
GPC4O75487 AC093578.1-201ENST00000415219 368 ntBASIC3.41□□□□□ -1.86
GPC4O75487 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
GPC4O75487 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.41□□□□□ -1.86
GPC4O75487 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.41□□□□□ -1.86
GPC4O75487 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.41□□□□□ -1.86
GPC4O75487 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
GPC4O75487 AC005094.1-201ENST00000440420 368 ntBASIC3.41□□□□□ -1.86
GPC4O75487 MTND6P13-201ENST00000443510 523 ntBASIC3.41□□□□□ -1.86
GPC4O75487 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.41□□□□□ -1.86
GPC4O75487 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.41□□□□□ -1.86
GPC4O75487 ELOCP30-201ENST00000447108 299 ntBASIC3.41□□□□□ -1.86
GPC4O75487 RNU6-956P-201ENST00000458868 103 ntBASIC3.41□□□□□ -1.86
GPC4O75487 RN7SL442P-201ENST00000473804 320 ntBASIC3.41□□□□□ -1.86
GPC4O75487 AL049874.1-201ENST00000489560 388 ntBASIC3.41□□□□□ -1.86
GPC4O75487 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.41□□□□□ -1.86
GPC4O75487 AC114797.1-201ENST00000514003 728 ntBASIC3.41□□□□□ -1.86
GPC4O75487 RNU2-46P-201ENST00000517038 113 ntBASIC3.41□□□□□ -1.86
GPC4O75487 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.41□□□□□ -1.86
GPC4O75487 AP003467.2-201ENST00000520175 319 ntBASIC3.41□□□□□ -1.86
GPC4O75487 HMGN1P28-201ENST00000521340 364 ntBASIC3.41□□□□□ -1.86
GPC4O75487 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.41□□□□□ -1.86
GPC4O75487 FAM60DP-201ENST00000524174 632 ntBASIC3.41□□□□□ -1.86
GPC4O75487 DEFB108A-201ENST00000530110 222 ntBASIC3.41□□□□□ -1.86
GPC4O75487 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
GPC4O75487 OR5B10P-201ENST00000532869 642 ntBASIC3.41□□□□□ -1.86
GPC4O75487 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.41□□□□□ -1.86
GPC4O75487 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.41□□□□□ -1.86
GPC4O75487 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
GPC4O75487 MIR3922-201ENST00000585192 84 ntBASIC3.41□□□□□ -1.86
GPC4O75487 SEPT7P9-203ENST00000604116 343 ntBASIC3.41□□□□□ -1.86
GPC4O75487 AC121334.2-201ENST00000605387 271 ntBASIC3.41□□□□□ -1.86
GPC4O75487 RNU6-87P-201ENST00000607561 108 ntBASIC3.41□□□□□ -1.86
GPC4O75487 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.41□□□□□ -1.86
GPC4O75487 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.41□□□□□ -1.86
GPC4O75487 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.41□□□□□ -1.86
GPC4O75487 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.41□□□□□ -1.86
GPC4O75487 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
GPC4O75487 TEX21P-201ENST00000447107 1476 ntBASIC3.41□□□□□ -1.86
GPC4O75487 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.41□□□□□ -1.86
GPC4O75487 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.4□□□□□ -1.86
GPC4O75487 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
GPC4O75487 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.4□□□□□ -1.86
GPC4O75487 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
GPC4O75487 RNY3P13-201ENST00000365542 102 ntBASIC3.4□□□□□ -1.87
GPC4O75487 AC110754.1-201ENST00000399740 601 ntBASIC3.4□□□□□ -1.87
GPC4O75487 RPS3AP3-201ENST00000411933 242 ntBASIC3.4□□□□□ -1.87
GPC4O75487 BTF3L4P1-201ENST00000413813 468 ntBASIC3.4□□□□□ -1.87
GPC4O75487 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.4□□□□□ -1.87
GPC4O75487 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.4□□□□□ -1.87
GPC4O75487 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.4□□□□□ -1.87
GPC4O75487 AP000907.1-201ENST00000428428 510 ntBASIC3.4□□□□□ -1.87
GPC4O75487 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.4□□□□□ -1.87
GPC4O75487 AC073063.1-201ENST00000434352 607 ntBASIC3.4□□□□□ -1.87
GPC4O75487 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.4□□□□□ -1.87
GPC4O75487 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.4□□□□□ -1.87
GPC4O75487 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.4□□□□□ -1.87
GPC4O75487 GAPDHP27-201ENST00000447427 1020 ntBASIC3.4□□□□□ -1.87
GPC4O75487 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
GPC4O75487 AL033528.1-201ENST00000453780 140 ntBASIC3.4□□□□□ -1.87
GPC4O75487 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.4□□□□□ -1.87
GPC4O75487 SNORD42A-201ENST00000459584 64 ntBASIC3.4□□□□□ -1.87
GPC4O75487 RPL21P104-201ENST00000464143 478 ntBASIC3.4□□□□□ -1.87
GPC4O75487 AC010631.1-201ENST00000474150 156 ntBASIC3.4□□□□□ -1.87
GPC4O75487 RAP1BP2-201ENST00000478270 544 ntBASIC3.4□□□□□ -1.87
GPC4O75487 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.4□□□□□ -1.87
GPC4O75487 AC107934.2-201ENST00000518653 310 ntBASIC3.4□□□□□ -1.87
GPC4O75487 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
GPC4O75487 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms