Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.2□□□□□ -1.58
SALL4Q9UJQ4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.2□□□□□ -1.58
SALL4Q9UJQ4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SALL4Q9UJQ4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
SALL4Q9UJQ4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SALL4Q9UJQ4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 RNU6-266P-201ENST00000364225 107 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 SNORD14.1-201ENST00000365609 90 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 Y_RNA.552-201ENST00000384665 112 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 MIR135A2-201ENST00000384854 100 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 MIR517A-201ENST00000385001 87 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 AC011933.1-201ENST00000413334 321 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 RNU6-1143P-201ENST00000516125 104 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 MIR5692A1-201ENST00000580523 69 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 MIR4436B2-201ENST00000581415 91 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 MIR4436B1-201ENST00000583272 91 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 Z98751.3-201ENST00000604447 521 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 HMGN2P28-201ENST00000606102 262 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 AC002044.1-201ENST00000606707 158 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 EIF3FP1-201ENST00000613970 806 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 AL138825.1-201ENST00000618587 192 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 MIR8062-201ENST00000621515 85 ntBASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SALL4Q9UJQ4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 AC138393.1-203ENST00000327086 343 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 RNU6-288P-201ENST00000363690 104 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 Y_RNA.210-201ENST00000364161 110 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 Y_RNA.288-201ENST00000364854 92 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 RNU6-842P-201ENST00000384269 107 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 AC097374.1-203ENST00000400783 485 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 MRPS18CP6-201ENST00000423587 223 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 AC006466.1-201ENST00000438721 289 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 DYNLT3P2-201ENST00000442517 295 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 SUMO1P2-201ENST00000452524 304 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 RNU7-187P-201ENST00000458985 68 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 AC008571.1-201ENST00000467232 300 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 AC097484.1-201ENST00000471148 389 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 RNU6-408P-201ENST00000515910 100 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 RN7SKP147-201ENST00000517154 244 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 OR4H12P-201ENST00000556269 907 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 AC109446.1-201ENST00000566172 220 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 AL450472.3-201ENST00000615578 367 ntBASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SALL4Q9UJQ4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 MTND5P7-201ENST00000413558 1798 ntBASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 Y_RNA.151-201ENST00000363566 112 ntBASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 RN7SKP103-201ENST00000363848 320 ntBASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 Y_RNA.447-201ENST00000384184 113 ntBASIC5.17□□□□□ -1.58
SALL4Q9UJQ4 SNORD96B-201ENST00000386148 79 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms