Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 MIR634-201ENST00000385208 97 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 RPL23AP32-201ENST00000395315 459 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 BTF3P7-201ENST00000407097 488 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AC068533.1-201ENST00000418542 415 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AL139415.2-201ENST00000431968 163 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 ATP5HP2-201ENST00000433885 485 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS45Q9NRW7 RPL35AP22-201ENST00000436855 335 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AC083863.1-201ENST00000438811 231 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 HMGB1P37-201ENST00000439613 609 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AC079448.1-201ENST00000449377 373 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AL359385.1-201ENST00000456509 365 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS45Q9NRW7 RN7SL323P-201ENST00000494712 295 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS45Q9NRW7 NARSP2-201ENST00000518524 679 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AP000907.2-201ENST00000530827 353 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS45Q9NRW7 UBE2L4-201ENST00000587688 464 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AL022099.1-201ENST00000604551 712 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AL355472.4-201ENST00000610233 626 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.04□□□□□ -1.76
VPS45Q9NRW7 AL158801.5-201ENST00000623123 465 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 IPO8P1-201ENST00000455509 3109 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 ELF2P3-201ENST00000445099 1506 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 PRO1804-201ENST00000623780 2050 ntBASIC4.04□□□□□ -1.76
VPS45Q9NRW7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
VPS45Q9NRW7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 RNU6-223P-201ENST00000362830 107 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 MTCO3P40-201ENST00000392516 676 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 CCNG1P1-201ENST00000406783 885 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 AC127391.1-201ENST00000411737 98 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 RHEBP3-201ENST00000411920 351 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 MTND4LP11-201ENST00000422184 280 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 KCTD9P3-201ENST00000434597 1169 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 AL451074.3-201ENST00000437709 472 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 AL136380.1-201ENST00000447970 162 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 C1DP4-201ENST00000455429 424 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 CEACAMP4-201ENST00000457676 421 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 AC026801.2-201ENST00000515352 425 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 HMGN1P28-201ENST00000521340 364 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 AL845331.3-202ENST00000562856 261 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 MIR3921-201ENST00000577308 85 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 MIR3118-1-201ENST00000581787 76 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 AP001029.3-201ENST00000588063 596 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 AC068790.3-201ENST00000602988 553 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 AL133173.2-201ENST00000614270 90 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 AC012150.2-201ENST00000621300 544 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 AL732618.1-201ENST00000623251 301 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 AC091953.2-201ENST00000623979 160 ntBASIC4.03□□□□□ -1.76
VPS45Q9NRW7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS45Q9NRW7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 HSPA8P1-201ENST00000425843 1833 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 AC090740.1-201ENST00000623193 2262 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 RNA5SP399-201ENST00000364003 117 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VPS45Q9NRW7 RNU6-754P-201ENST00000391166 107 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 CIR1P3-201ENST00000405137 479 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 MIR1290-201ENST00000408735 78 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 RNU4-55P-201ENST00000410731 137 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 MTND3P17-201ENST00000416968 344 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 MTATP6P4-201ENST00000427725 675 ntBASIC4.02□□□□□ -1.77
VPS45Q9NRW7 DPPA2P1-201ENST00000428060 556 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms