Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.54□□□□□ -1.84
PKP4Q99569 AC010655.1-201ENST00000449336 292 ntBASIC3.54□□□□□ -1.84
PKP4Q99569 SSXP4-201ENST00000451349 245 ntBASIC3.54□□□□□ -1.84
PKP4Q99569 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.54□□□□□ -1.84
PKP4Q99569 AC090453.1-201ENST00000495560 436 ntBASIC3.54□□□□□ -1.84
PKP4Q99569 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.54□□□□□ -1.84
PKP4Q99569 MLLT10P2-201ENST00000506434 249 ntBASIC3.54□□□□□ -1.84
PKP4Q99569 KLHL2P1-201ENST00000508691 521 ntBASIC3.54□□□□□ -1.84
PKP4Q99569 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.54□□□□□ -1.84
PKP4Q99569 AC034159.1-201ENST00000513885 583 ntBASIC3.54□□□□□ -1.84
PKP4Q99569 AP003467.2-201ENST00000520175 319 ntBASIC3.54□□□□□ -1.84
PKP4Q99569 COX6CP8-201ENST00000522620 226 ntBASIC3.54□□□□□ -1.84
PKP4Q99569 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PKP4Q99569 SNRPGP16-201ENST00000533275 226 ntBASIC3.54□□□□□ -1.84
PKP4Q99569 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.54□□□□□ -1.84
PKP4Q99569 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.54□□□□□ -1.84
PKP4Q99569 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.54□□□□□ -1.84
PKP4Q99569 AC091965.4-201ENST00000607691 587 ntBASIC3.54□□□□□ -1.84
PKP4Q99569 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.54□□□□□ -1.84
PKP4Q99569 AC004067.1-201ENST00000608733 700 ntBASIC3.54□□□□□ -1.84
PKP4Q99569 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.54□□□□□ -1.84
PKP4Q99569 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PKP4Q99569 CR848007.1-201ENST00000442354 1699 ntBASIC3.54□□□□□ -1.84
PKP4Q99569 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PKP4Q99569 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
PKP4Q99569 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.53□□□□□ -1.84
PKP4Q99569 AC007256.1-201ENST00000392253 2765 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.53□□□□□ -1.84
PKP4Q99569 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKP4Q99569 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKP4Q99569 AC007656.2-201ENST00000624902 4547 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PKP4Q99569 RPL7P26-201ENST00000333817 754 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 RNA5SP124-201ENST00000362739 110 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 Y_RNA.256-201ENST00000364594 104 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 Y_RNA.372-201ENST00000365599 102 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
PKP4Q99569 Y_RNA.450-201ENST00000384198 113 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PKP4Q99569 RPS3AP36-201ENST00000398190 775 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 AL591034.1-201ENST00000407447 340 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 FCF1P10-201ENST00000407590 479 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.53□□□□□ -1.84
PKP4Q99569 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.53□□□□□ -1.84
PKP4Q99569 TIMM9P3-201ENST00000428659 274 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.53□□□□□ -1.84
PKP4Q99569 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.53□□□□□ -1.84
PKP4Q99569 AC009961.2-201ENST00000435771 251 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.53□□□□□ -1.84
PKP4Q99569 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.53□□□□□ -1.84
PKP4Q99569 Z95327.1-201ENST00000446082 482 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.53□□□□□ -1.84
PKP4Q99569 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.53□□□□□ -1.84
PKP4Q99569 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.53□□□□□ -1.84
PKP4Q99569 AC013267.1-201ENST00000458227 267 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKP4Q99569 AC087312.1-201ENST00000471411 480 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 HMGN1P11-201ENST00000508668 303 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 ARL2BPP6-201ENST00000512757 439 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 RNU6-528P-201ENST00000516926 100 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 RNU6-1003P-201ENST00000517099 105 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.53□□□□□ -1.84
PKP4Q99569 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.53□□□□□ -1.84
PKP4Q99569 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.53□□□□□ -1.84
PKP4Q99569 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKP4Q99569 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.53□□□□□ -1.84
PKP4Q99569 SETP7-201ENST00000552169 453 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 AL391840.1-201ENST00000571144 367 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 AC006504.3-201ENST00000586818 523 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 U7.8-201ENST00000619968 63 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 AL356585.4-201ENST00000623078 1229 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 AL732618.1-201ENST00000623251 301 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 PISRT1-201ENST00000626175 531 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.53□□□□□ -1.84
PKP4Q99569 AC110994.2-201ENST00000635481 492 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 AC244205.2-202ENST00000635781 342 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 MIR6863-201ENST00000636112 90 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 MIR3688-2-201ENST00000636963 87 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.53□□□□□ -1.84
PKP4Q99569 AL732372.2-225ENST00000642124 456 ntBASIC3.53□□□□□ -1.84
PKP4Q99569 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKP4Q99569 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKP4Q99569 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKP4Q99569 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
PKP4Q99569 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKP4Q99569 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKP4Q99569 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PKP4Q99569 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.52□□□□□ -1.85
PKP4Q99569 RNY4P34-201ENST00000364779 95 ntBASIC3.52□□□□□ -1.85
PKP4Q99569 Y_RNA.390-201ENST00000383932 102 ntBASIC3.52□□□□□ -1.85
PKP4Q99569 MIR554-201ENST00000384874 96 ntBASIC3.52□□□□□ -1.85
PKP4Q99569 MTCO3P40-201ENST00000392516 676 ntBASIC3.52□□□□□ -1.85
PKP4Q99569 AL031679.1-201ENST00000400616 525 ntBASIC3.52□□□□□ -1.85
PKP4Q99569 AL391417.1-201ENST00000404100 426 ntBASIC3.52□□□□□ -1.85
PKP4Q99569 AL590002.1-201ENST00000406554 418 ntBASIC3.52□□□□□ -1.85
PKP4Q99569 RPS3AP24-201ENST00000407896 734 ntBASIC3.52□□□□□ -1.85
PKP4Q99569 MTCO1P17-201ENST00000411522 491 ntBASIC3.52□□□□□ -1.85
PKP4Q99569 AC007389.2-201ENST00000434630 306 ntBASIC3.52□□□□□ -1.85
PKP4Q99569 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PKP4Q99569 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms