Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RPL12P25-202ENST00000598100 674 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 AL358072.1-201ENST00000604156 575 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 AL133173.2-201ENST00000614270 90 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 AC034102.8-201ENST00000615146 484 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 AL137003.2-201ENST00000606924 2538 ntBASIC3.32□□□□□ -1.88
CMTM3Q96MX0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CMTM3Q96MX0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 Y_RNA.51-201ENST00000362725 102 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 Y_RNA.201-201ENST00000364052 96 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 RNU4-40P-201ENST00000364351 143 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 SNORA75-201ENST00000384158 137 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 RNU6-1035P-201ENST00000384477 107 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 MIR585-201ENST00000384887 94 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 RPS3AP36-201ENST00000398190 775 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 MIR937-201ENST00000401271 86 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 HSPE1P12-201ENST00000412576 301 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 RPS15AP6-201ENST00000420703 385 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 RPL31P12-201ENST00000422587 358 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 ISCA1P6-201ENST00000427740 390 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 RPS29P17-201ENST00000430795 166 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AC010153.1-201ENST00000432862 727 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AC104850.1-201ENST00000435940 476 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 HMGB3P12-201ENST00000438745 556 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 CBX1P1-201ENST00000440184 427 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AL031667.1-201ENST00000440222 725 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AL136380.1-201ENST00000447970 162 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 MTND1P29-201ENST00000448112 647 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 SNRPGP6-201ENST00000451124 220 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 Vault.3-201ENST00000516676 95 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 RNU6-1092P-201ENST00000516955 87 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AC011602.1-201ENST00000546484 331 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AC010678.1-201ENST00000614118 713 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 AC244100.1-202ENST00000621554 382 ntBASIC3.31□□□□□ -1.88
CMTM3Q96MX0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CMTM3Q96MX0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 RNU6-960P-201ENST00000364056 120 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 RNU6-270P-201ENST00000364131 105 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 RN7SKP280-201ENST00000364196 304 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 RNY1P12-201ENST00000364251 105 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 RNA5SP505-201ENST00000364748 108 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 SNORA20.2-201ENST00000383922 131 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 RNU6-195P-201ENST00000411352 109 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 RPL7P46-201ENST00000425129 740 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 OR5BE1P-201ENST00000425977 939 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 AC073614.1-201ENST00000438690 650 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 NEFMP1-201ENST00000443423 1006 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 AC092185.1-201ENST00000491371 97 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 AC022447.1-201ENST00000515358 464 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 RNU7-51P-201ENST00000516560 62 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 RNU6-352P-201ENST00000516908 107 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 AC022616.3-201ENST00000523940 148 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 MIR3167-201ENST00000579623 85 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.3□□□□□ -1.88
CMTM3Q96MX0 AC015871.2-201ENST00000603605 948 ntBASIC3.3□□□□□ -1.88
CMTM3Q96MX0 AC064872.1-201ENST00000604823 1072 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms