Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 SCARNA16.4-201ENST00000516956 187 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 AC027288.2-201ENST00000553028 243 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 AL110118.1-201ENST00000553543 400 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-CQ95604 AC209154.1-201ENST00000582156 337 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
HLA-CQ95604 AL645944.1-201ENST00000603857 493 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 AL161629.2-201ENST00000615347 275 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 AL138820.1-201ENST00000617901 5305 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 AL078621.3-201ENST00000623707 2042 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.78□□□□□ -1.48
HLA-CQ95604 OR9K1P-202ENST00000641111 3217 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-CQ95604 AC004076.2-201ENST00000620532 3323 ntBASIC5.78□□□□□ -1.48
HLA-CQ95604 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-CQ95604 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-CQ95604 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-CQ95604 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HLA-CQ95604 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-CQ95604 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-CQ95604 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-CQ95604 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-CQ95604 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-CQ95604 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-CQ95604 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-CQ95604 AC107027.3-201ENST00000565095 3473 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-CQ95604 AL731556.1-201ENST00000394628 3711 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-CQ95604 Y_RNA.82-201ENST00000363000 102 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 Y_RNA.92-201ENST00000363043 102 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 RN7SKP113-201ENST00000363891 295 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 Y_RNA.235-201ENST00000364412 102 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 SNORD14B-201ENST00000364533 90 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 Y_RNA.306-201ENST00000365015 102 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 Y_RNA.312-201ENST00000365089 102 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 Y_RNA.322-201ENST00000365151 102 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 MIR130A-201ENST00000385274 89 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-CQ95604 RN7SKP151-201ENST00000410230 316 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 RNU4-78P-201ENST00000410940 126 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 AC116036.1-201ENST00000412199 367 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-CQ95604 AL592148.1-201ENST00000413568 445 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 AL627311.1-201ENST00000431514 115 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-CQ95604 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-CQ95604 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.77□□□□□ -1.49
HLA-CQ95604 Y_RNA.650-201ENST00000459002 102 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 RPL37P6-202ENST00000464216 403 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 AC009127.1-201ENST00000467090 155 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 RNU6-346P-201ENST00000516288 111 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 Y_RNA.777-201ENST00000516982 102 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 AC024940.3-201ENST00000538551 316 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-CQ95604 AC005476.1-201ENST00000554427 397 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 PARP1P2-201ENST00000556806 195 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 MIR4270-201ENST00000581799 70 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 Y_RNA.771-201ENST00000598668 102 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 AC008121.1-201ENST00000603244 268 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 Y_RNA.789-201ENST00000622480 102 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-CQ95604 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.77□□□□□ -1.49
HLA-CQ95604 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HLA-CQ95604 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.77□□□□□ -1.49
HLA-CQ95604 AL391684.1-202ENST00000641293 1636 ntBASIC5.77□□□□□ -1.49
HLA-CQ95604 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-CQ95604 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HLA-CQ95604 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-CQ95604 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-CQ95604 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HLA-CQ95604 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-CQ95604 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HLA-CQ95604 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.77□□□□□ -1.49
HLA-CQ95604 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-CQ95604 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
HLA-CQ95604 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-CQ95604 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-CQ95604 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-CQ95604 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-CQ95604 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-CQ95604 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
HLA-CQ95604 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-CQ95604 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-CQ95604 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-CQ95604 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
HLA-CQ95604 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.76□□□□□ -1.49
HLA-CQ95604 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-CQ95604 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HLA-CQ95604 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
HLA-CQ95604 RNU6-1167P-201ENST00000363227 94 ntBASIC5.76□□□□□ -1.49
HLA-CQ95604 RNU4-9P-201ENST00000364951 139 ntBASIC5.76□□□□□ -1.49
HLA-CQ95604 SNORA70E-201ENST00000384492 135 ntBASIC5.76□□□□□ -1.49
HLA-CQ95604 BMS1P22-201ENST00000414726 313 ntBASIC5.76□□□□□ -1.49
HLA-CQ95604 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.76□□□□□ -1.49
HLA-CQ95604 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.76□□□□□ -1.49
HLA-CQ95604 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.76□□□□□ -1.49
HLA-CQ95604 RN7SL354P-201ENST00000469282 294 ntBASIC5.76□□□□□ -1.49
HLA-CQ95604 IGLV2-34-201ENST00000490007 283 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms