Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CLRN3Q8NCR9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.96□□□□□ -1.77
CLRN3Q8NCR9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.96□□□□□ -1.77
CLRN3Q8NCR9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 Y_RNA.135-201ENST00000363439 95 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 RNU6-1303P-201ENST00000364841 107 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 RN7SKP187-201ENST00000365536 330 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 SNORD116-11-201ENST00000383882 92 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 RNU6-214P-201ENST00000384130 107 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 RNU6-140P-201ENST00000384566 108 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 GCNT1P4-201ENST00000404096 329 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 RN7SKP126-201ENST00000411143 300 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 RN7SKP53-201ENST00000411337 315 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AF186996.5-201ENST00000418098 904 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 MTND1P14-201ENST00000427400 950 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 MYL8P-204ENST00000431574 518 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AL353662.1-201ENST00000439099 327 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 ATP6V1E1P1-201ENST00000439215 681 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AL359672.1-201ENST00000442302 409 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 RANP8-201ENST00000444720 713 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 NDUFB1P2-201ENST00000449477 176 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AC087884.1-201ENST00000469738 328 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AC084357.1-201ENST00000473404 255 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 LSM3P4-201ENST00000502948 309 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 HMGN1P13-201ENST00000505795 138 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AC008526.1-201ENST00000509149 338 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AC006499.6-201ENST00000511169 607 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 CASP1P1-201ENST00000526345 212 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AL356055.1-201ENST00000602528 446 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AC124916.2-201ENST00000604416 224 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AL138726.1-201ENST00000614873 333 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AC004825.2-201ENST00000616634 455 ntBASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CLRN3Q8NCR9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 AC002546.1-201ENST00000588041 2504 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 COX6B1P3-201ENST00000312310 260 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 Y_RNA.67-201ENST00000362870 100 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 FAT1P1-201ENST00000406588 507 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 MIR548F5-201ENST00000408421 86 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 TOMM20P4-201ENST00000427861 435 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 RPL32P28-201ENST00000443577 397 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 PPIAP27-201ENST00000453800 265 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 RPS26P15-201ENST00000488067 348 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 AC026801.1-201ENST00000497178 464 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 AC006427.1-201ENST00000514359 712 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 SCARNA18.1-201ENST00000516330 83 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 COPS8P3-201ENST00000526024 482 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 AC020914.4-201ENST00000597690 277 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 AC027309.3-201ENST00000623419 351 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 AC073593.1-201ENST00000624500 411 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 AC006026.1-201ENST00000444025 1803 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 ZNF519P1-201ENST00000449011 1626 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 AC008725.1-201ENST00000605123 2263 ntBASIC3.95□□□□□ -1.78
CLRN3Q8NCR9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CLRN3Q8NCR9 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms