Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC114781.4-201ENST00000513707 639 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AP003497.1-201ENST00000528472 562 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AC090616.5-202ENST00000582111 297 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AC010680.4-201ENST00000605334 543 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 MIR486-1-201ENST00000612171 68 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AL020991.1-201ENST00000612314 373 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AC079597.1-201ENST00000624306 508 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AC009902.3-201ENST00000606235 2172 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 AC006504.1-201ENST00000562493 3666 ntBASIC4.45□□□□□ -1.7
UBE3BQ7Z3V4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 RNU6-97P-201ENST00000363387 104 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 RNA5SP50-201ENST00000363731 107 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 RNA5SP72-201ENST00000364442 117 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 MT-TL1-201ENST00000386347 75 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 U3.20-201ENST00000390909 217 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 U3.29-201ENST00000391296 212 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 MTND4LP20-201ENST00000402379 270 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 RN7SKP53-201ENST00000411337 315 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 BX842559.1-201ENST00000419615 532 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC019097.1-201ENST00000424783 735 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC097713.2-201ENST00000430199 356 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 USP9YP15-201ENST00000442391 422 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC104308.1-201ENST00000454621 333 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC055855.1-201ENST00000489563 579 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 HSPD1P15-201ENST00000505573 1122 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 MIR2114-201ENST00000516645 80 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 MTND1P35-201ENST00000526739 508 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC060780.3-201ENST00000589464 80 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 KLKP1-201ENST00000595979 403 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC025946.2-201ENST00000603398 234 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC025588.3-201ENST00000604182 274 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC096577.2-201ENST00000611455 153 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AL359314.1-201ENST00000616913 261 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC104985.2-201ENST00000620598 500 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AL732372.2-225ENST00000642124 456 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC011460.1-201ENST00000636268 1834 ntBASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
UBE3BQ7Z3V4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 CASC19-280ENST00000642102 1351 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 RNU6-797P-201ENST00000363101 109 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 SNORD17-201ENST00000390930 237 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 SNORA11.1-201ENST00000408133 129 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 AC009237.5-201ENST00000414271 501 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 AC127526.1-201ENST00000417526 366 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 RPS12P23-201ENST00000419579 400 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 RPL21P109-201ENST00000422213 475 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 USP12PX-201ENST00000432383 1057 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 RPL7P28-201ENST00000437739 740 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 SNRPEP8-201ENST00000442866 260 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 BX276092.4-201ENST00000452056 248 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 AC079382.1-201ENST00000493346 557 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 AC098799.2-201ENST00000509466 868 ntBASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.43□□□□□ -1.7
UBE3BQ7Z3V4 AC104383.1-201ENST00000530297 370 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms