Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NUBP1P53384 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NUBP1P53384 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NUBP1P53384 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NUBP1P53384 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NUBP1P53384 AC123769.2-201ENST00000624332 5984 ntBASIC6.43□□□□□ -1.38
NUBP1P53384 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
NUBP1P53384 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NUBP1P53384 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
NUBP1P53384 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NUBP1P53384 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NUBP1P53384 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.42□□□□□ -1.38
NUBP1P53384 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NUBP1P53384 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.42□□□□□ -1.38
NUBP1P53384 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NUBP1P53384 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
NUBP1P53384 SNORA26.3-201ENST00000391119 136 ntBASIC6.42□□□□□ -1.38
NUBP1P53384 SNORA79-201ENST00000408376 140 ntBASIC6.42□□□□□ -1.38
NUBP1P53384 AC015977.1-201ENST00000418887 292 ntBASIC6.42□□□□□ -1.38
NUBP1P53384 RN7SL466P-201ENST00000497546 295 ntBASIC6.42□□□□□ -1.38
NUBP1P53384 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.42□□□□□ -1.38
NUBP1P53384 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC6.42□□□□□ -1.38
NUBP1P53384 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.42□□□□□ -1.38
NUBP1P53384 RPL12P48-201ENST00000605620 304 ntBASIC6.42□□□□□ -1.38
NUBP1P53384 PRNCR1-201ENST00000635449 12727 ntBASIC6.42□□□□□ -1.38
NUBP1P53384 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
NUBP1P53384 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC6.42□□□□□ -1.38
NUBP1P53384 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.42□□□□□ -1.38
NUBP1P53384 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.42□□□□□ -1.38
NUBP1P53384 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
NUBP1P53384 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
NUBP1P53384 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
NUBP1P53384 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
NUBP1P53384 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
NUBP1P53384 OFD1P6Y-202ENST00000451061 2724 ntBASIC6.41□□□□□ -1.38
NUBP1P53384 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NUBP1P53384 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NUBP1P53384 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NUBP1P53384 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.41□□□□□ -1.38
NUBP1P53384 AC034229.2-201ENST00000566945 2508 ntBASIC6.41□□□□□ -1.38
NUBP1P53384 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.41□□□□□ -1.38
NUBP1P53384 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
NUBP1P53384 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NUBP1P53384 RNU6-454P-201ENST00000364292 107 ntBASIC6.41□□□□□ -1.38
NUBP1P53384 SNORA12.1-201ENST00000390873 148 ntBASIC6.41□□□□□ -1.38
NUBP1P53384 OR2AH1P-201ENST00000425717 928 ntBASIC6.41□□□□□ -1.38
NUBP1P53384 AC092017.2-201ENST00000427600 362 ntBASIC6.41□□□□□ -1.38
NUBP1P53384 AC125238.1-201ENST00000448842 249 ntBASIC6.41□□□□□ -1.38
NUBP1P53384 AC012308.1-201ENST00000451232 178 ntBASIC6.41□□□□□ -1.38
NUBP1P53384 AC108145.1-201ENST00000503770 153 ntBASIC6.41□□□□□ -1.38
NUBP1P53384 RNU4-60P-201ENST00000517239 135 ntBASIC6.41□□□□□ -1.38
NUBP1P53384 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.41□□□□□ -1.38
NUBP1P53384 AC013283.1-201ENST00000557282 492 ntBASIC6.41□□□□□ -1.38
NUBP1P53384 TPRX1P1-201ENST00000557620 319 ntBASIC6.41□□□□□ -1.38
NUBP1P53384 AC025946.2-201ENST00000603398 234 ntBASIC6.41□□□□□ -1.38
NUBP1P53384 AC004832.5-201ENST00000608677 401 ntBASIC6.41□□□□□ -1.38
NUBP1P53384 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.41□□□□□ -1.38
NUBP1P53384 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NUBP1P53384 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NUBP1P53384 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.41□□□□□ -1.38
NUBP1P53384 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.41□□□□□ -1.38
NUBP1P53384 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.41□□□□□ -1.38
NUBP1P53384 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NUBP1P53384 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.41□□□□□ -1.38
NUBP1P53384 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NUBP1P53384 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
NUBP1P53384 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NUBP1P53384 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
NUBP1P53384 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC6.41□□□□□ -1.38
NUBP1P53384 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NUBP1P53384 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NUBP1P53384 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NUBP1P53384 AC107027.3-201ENST00000565095 3473 ntBASIC6.4□□□□□ -1.38
NUBP1P53384 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NUBP1P53384 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NUBP1P53384 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
NUBP1P53384 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
NUBP1P53384 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NUBP1P53384 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NUBP1P53384 RNA5SP110-201ENST00000362638 115 ntBASIC6.4□□□□□ -1.38
NUBP1P53384 RNU6-799P-201ENST00000363567 107 ntBASIC6.4□□□□□ -1.38
NUBP1P53384 SNORA26.2-201ENST00000390922 122 ntBASIC6.4□□□□□ -1.38
NUBP1P53384 RN7SKP281-201ENST00000410472 352 ntBASIC6.4□□□□□ -1.38
NUBP1P53384 FAR2P2-201ENST00000413041 594 ntBASIC6.4□□□□□ -1.38
NUBP1P53384 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.4□□□□□ -1.38
NUBP1P53384 RN7SL193P-201ENST00000491708 276 ntBASIC6.4□□□□□ -1.38
NUBP1P53384 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC6.4□□□□□ -1.38
NUBP1P53384 BX510359.5-201ENST00000515651 304 ntBASIC6.4□□□□□ -1.38
NUBP1P53384 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.4□□□□□ -1.38
NUBP1P53384 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.4□□□□□ -1.38
NUBP1P53384 UBE2Q2P6-201ENST00000612666 153 ntBASIC6.4□□□□□ -1.38
NUBP1P53384 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
NUBP1P53384 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.4□□□□□ -1.38
NUBP1P53384 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NUBP1P53384 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.39
NUBP1P53384 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NUBP1P53384 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NUBP1P53384 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NUBP1P53384 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NUBP1P53384 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms