Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
GFRA3O60609 MTND5P18-201ENST00000445624 1801 ntBASIC5.55□□□□□ -1.52
GFRA3O60609 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.55□□□□□ -1.52
GFRA3O60609 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA3O60609 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
GFRA3O60609 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
GFRA3O60609 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
GFRA3O60609 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
GFRA3O60609 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
GFRA3O60609 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
GFRA3O60609 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA3O60609 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
GFRA3O60609 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA3O60609 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.54□□□□□ -1.52
GFRA3O60609 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
GFRA3O60609 AL079305.1-201ENST00000623159 3008 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA3O60609 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA3O60609 CUL1P1-201ENST00000509510 2425 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA3O60609 snoU2_19.4-201ENST00000364329 80 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 RNU6-407P-201ENST00000365280 104 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 RNU6-213P-201ENST00000384051 104 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 AL353621.1-201ENST00000418219 243 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC5.54□□□□□ -1.52
GFRA3O60609 RPS5P7-201ENST00000456664 608 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 Y_RNA.637-201ENST00000459424 114 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 RN7SKP21-201ENST00000516503 220 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 AC109810.1-201ENST00000534066 224 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.54□□□□□ -1.52
GFRA3O60609 AP006289.1-201ENST00000538089 277 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC5.54□□□□□ -1.52
GFRA3O60609 MIR5096-201ENST00000583713 70 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 AC069307.1-201ENST00000602820 447 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 AC008814.1-201ENST00000603797 406 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.54□□□□□ -1.52
GFRA3O60609 AC068724.3-201ENST00000625906 87 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 MIR6844-201ENST00000637122 62 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 AC074101.1-201ENST00000637861 241 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA3O60609 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC5.54□□□□□ -1.52
GFRA3O60609 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
GFRA3O60609 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA3O60609 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.54□□□□□ -1.52
GFRA3O60609 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.54□□□□□ -1.52
GFRA3O60609 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA3O60609 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
GFRA3O60609 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
GFRA3O60609 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.54□□□□□ -1.52
GFRA3O60609 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA3O60609 AL121950.1-201ENST00000624993 2077 ntBASIC5.54□□□□□ -1.52
GFRA3O60609 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.54□□□□□ -1.52
GFRA3O60609 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.54□□□□□ -1.52
GFRA3O60609 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
GFRA3O60609 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA3O60609 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.53□□□□□ -1.52
GFRA3O60609 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA3O60609 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.53□□□□□ -1.52
GFRA3O60609 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA3O60609 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA3O60609 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
GFRA3O60609 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.53□□□□□ -1.52
GFRA3O60609 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.53□□□□□ -1.52
GFRA3O60609 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA3O60609 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA3O60609 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA3O60609 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.53□□□□□ -1.52
GFRA3O60609 RNA5SP361-201ENST00000362686 118 ntBASIC5.53□□□□□ -1.52
GFRA3O60609 RNU6-1124P-201ENST00000384169 107 ntBASIC5.53□□□□□ -1.52
GFRA3O60609 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.53□□□□□ -1.52
GFRA3O60609 AL158147.1-201ENST00000443970 75 ntBASIC5.53□□□□□ -1.52
GFRA3O60609 AC073264.2-201ENST00000448886 166 ntBASIC5.53□□□□□ -1.52
GFRA3O60609 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.53□□□□□ -1.52
GFRA3O60609 VN1R105P-201ENST00000486595 910 ntBASIC5.53□□□□□ -1.52
GFRA3O60609 HMGB1P40-201ENST00000525121 540 ntBASIC5.53□□□□□ -1.52
GFRA3O60609 AL590392.1-201ENST00000604960 446 ntBASIC5.53□□□□□ -1.52
GFRA3O60609 MIR15A-201ENST00000607334 83 ntBASIC5.53□□□□□ -1.52
GFRA3O60609 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.53□□□□□ -1.52
GFRA3O60609 AL445647.2-201ENST00000615170 130 ntBASIC5.53□□□□□ -1.52
GFRA3O60609 AC090607.5-201ENST00000615692 224 ntBASIC5.53□□□□□ -1.52
GFRA3O60609 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA3O60609 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA3O60609 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
GFRA3O60609 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA3O60609 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA3O60609 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA3O60609 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
GFRA3O60609 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA3O60609 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA3O60609 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA3O60609 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA3O60609 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
GFRA3O60609 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.53□□□□□ -1.52
GFRA3O60609 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA3O60609 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.52□□□□□ -1.53
GFRA3O60609 MFSD8-216ENST00000641147 4009 ntBASIC5.52□□□□□ -1.53
GFRA3O60609 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA3O60609 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA3O60609 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.52□□□□□ -1.53
GFRA3O60609 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms