Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AMZ2P1-203ENST00000565833 850 ntBASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC074051.3-201ENST00000570238 358 ntBASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC012443.1-201ENST00000605605 231 ntBASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC055876.5-201ENST00000605667 259 ntBASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 uc_338.20-201ENST00000621563 178 ntBASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC090617.9-201ENST00000623751 147 ntBASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 CU459211.1-201ENST00000635667 749 ntBASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 SEC63P2-201ENST00000503863 1939 ntBASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC092881.1-201ENST00000638218 2733 ntBASIC1.63□□□□□ -2.15
TCRBV4S1A1TA0A5B7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 RNA5SP432-201ENST00000362480 116 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 SNORD82-201ENST00000365530 70 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 RNU1-52P-201ENST00000384190 164 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AL079342.1-201ENST00000401460 267 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 U3.40-201ENST00000408706 208 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 RNU4-72P-201ENST00000410754 173 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 RNU2-40P-201ENST00000410833 196 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 PNRC2P1-201ENST00000423940 420 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AL591806.2-201ENST00000433122 173 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 MTND4LP10-201ENST00000435146 291 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 IPO7P1-201ENST00000442031 636 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 RNF2P1-201ENST00000442955 1010 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AL589880.1-201ENST00000448271 287 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC022493.1-201ENST00000492984 337 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 RNU6-1095P-201ENST00000516148 108 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 EEF1B2P4-201ENST00000551398 348 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 MIR4658-201ENST00000584344 65 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AL136363.1-201ENST00000605349 337 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AL161629.2-201ENST00000615347 275 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC098657.3-201ENST00000620434 263 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC009318.4-201ENST00000620496 486 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 DUXAP9-208ENST00000622815 614 ntBASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TCRBV4S1A1TA0A5B7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC025263.3-201ENST00000622965 1396 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 MTCO1P18-201ENST00000455518 1419 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 RNU6-173P-201ENST00000364215 104 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 ZYG11AP1-201ENST00000430329 837 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AL445646.1-201ENST00000431784 216 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC092573.2-201ENST00000434546 243 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 HMGN3P1-201ENST00000453847 193 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 snoU13.23-201ENST00000458863 104 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 NAP1L1P3-201ENST00000462291 880 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 RPL31P41-201ENST00000477967 372 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 OR9N1P-202ENST00000494289 481 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC116337.1-201ENST00000509680 687 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 RNU6-27P-201ENST00000516146 107 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 RPS3AP23-202ENST00000574601 686 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC011260.1-201ENST00000578420 472 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AC120053.1-201ENST00000607706 736 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 Y_RNA.783-201ENST00000613546 102 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 SDAD1P2-201ENST00000441308 2028 ntBASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
TCRBV4S1A1TA0A5B7 NUP58P1-201ENST00000502546 1738 ntBASIC1.6□□□□□ -2.15
TCRBV4S1A1TA0A5B7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TCRBV4S1A1TA0A5B7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.6□□□□□ -2.15
TCRBV4S1A1TA0A5B7 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TCRBV4S1A1TA0A5B7 RNA5SP27-201ENST00000363839 119 ntBASIC1.6□□□□□ -2.15
TCRBV4S1A1TA0A5B7 RNU6-1140P-201ENST00000410517 106 ntBASIC1.6□□□□□ -2.15
TCRBV4S1A1TA0A5B7 RNU6-193P-201ENST00000410977 107 ntBASIC1.6□□□□□ -2.15
TCRBV4S1A1TA0A5B7 AL513331.1-201ENST00000411908 397 ntBASIC1.6□□□□□ -2.15
TCRBV4S1A1TA0A5B7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.6□□□□□ -2.15
TCRBV4S1A1TA0A5B7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms