Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 ANKRD18DP-204ENST00000455355 1975 ntBASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HLA-DRB4X5D2U9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 AC093503.3-201ENST00000624917 2352 ntBASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 KRT16P5-201ENST00000455284 522 ntBASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 C1QL1P1-201ENST00000568105 661 ntBASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 AC110285.5-201ENST00000611501 352 ntBASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 ITM2C-210ENST00000620962 501 ntBASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 Z82202.1-201ENST00000623446 1880 ntBASIC14.38□□□□□ -0.11
HLA-DRB4X5D2U9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 KRT18P29-201ENST00000397031 1267 ntBASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 TSPY20P-201ENST00000450910 630 ntBASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DRB4X5D2U9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 AC120498.9-201ENST00000339021 3867 ntBASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms