Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 AC133681.1-201ENST00000465482 601 ntBASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 AC073648.6-201ENST00000641589 218 ntBASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 AL138781.2-201ENST00000617896 1843 ntBASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PCDHGA11Q9Y5H2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 AC124016.1-201ENST00000609552 612 ntBASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 AC110285.5-201ENST00000611501 352 ntBASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGA11Q9Y5H2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGA11Q9Y5H2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGA11Q9Y5H2 AC005082.1-201ENST00000413042 2259 ntBASIC18.52■□□□□ 0.55
PCDHGA11Q9Y5H2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGA11Q9Y5H2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDHGA11Q9Y5H2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 POU5F1P3-201ENST00000428824 1078 ntBASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 AL161938.1-201ENST00000569833 2180 ntBASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGA11Q9Y5H2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGA11Q9Y5H2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA11Q9Y5H2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA11Q9Y5H2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA11Q9Y5H2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA11Q9Y5H2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA11Q9Y5H2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PCDHGA11Q9Y5H2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA11Q9Y5H2 AC128676.1-201ENST00000454392 318 ntBASIC18.5■□□□□ 0.55
PCDHGA11Q9Y5H2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
PCDHGA11Q9Y5H2 AL160286.2-201ENST00000567150 934 ntBASIC18.5■□□□□ 0.55
PCDHGA11Q9Y5H2 HLA-A-209ENST00000638375 975 ntBASIC18.5■□□□□ 0.55
PCDHGA11Q9Y5H2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA11Q9Y5H2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
PCDHGA11Q9Y5H2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDHGA11Q9Y5H2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGA11Q9Y5H2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms